Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00429 ATGAGCACCGCCAACCCTAACAAGCCTTCTTCTCCTCCGCCTACCATTAAACAACGTAGGCTCACCCGACAGGGGAGGCTCCGACACCTCACTCACAAAGACTCTGCTCTGCATTCCACCACTTCTCTACCATCTTCTCCTCTTCCTTCCTTTAAGTCCACTTCCGCTTCCGACCATTGGTCTTCCTCTGCGGTTCCACAACCACTTCCACGTCCCGACTCCCCGTTGACCCGCCGGCACGACCATCATCACCTCGGATCTCCCCCTTTCGAACATCCTGGCTTCGCTTTTCCCAGGTCGGTGGATCATGATGCAGGGAGAAGTCTAAGGTCTGCCAGCAATTTGGGCAGACCTTCTTTTGATCCGGTGGTTCCAAATGCCAAATATGATTTGAGAGTAAATATTCCGCCTGCAAGAGTGTTGGCAGGCAATACTAGTTCATGTAAAGATCACAGGGAACTTTCTCATGATAATGATTCTGAAAATGTTTCCAACTTGAGATTGCATTTTTCGGCCAAGAGTGCTCCCAACAGCATATTCTCCAGCCCTGTTACTAGTCCACGTAGATCAAGCAATGTAGATTTCTATGATCCTTCCATCATTTTTCCTCAAGATTTTAATGACATTTTGAGAGTGTCACCGGCTAAAACTGCTCAGAGTCCAGACCGGTCTCCTCTGCGCAGCCCAGGGAGCCACCTCAATCTAGAGGGATGTCAGAGTCAGCTCCATAAAATTAGCTCAAGAGTGTTACCTGAAAATAATCATGTTGATGCACATCCACTGCCCCTTCCTCCCAGAGCTTCACCACCACCAGCACAGTCATCTCCGCAGCATCAACCAAGTATCGTGCACATCCCCTCTGAAAATTCATCTTCAATGAAAGGTCAATGGCAGAAAGGAAAACTTATAGGGCGAGGATCATATGGATCTGTTTATCACGCAACCAACTTAGAGACTGGGGCCTCGTGTGCAATGAAAGAGGTGGAAATGTTCCCCGATGATCCTAAATCCGCTGACTCCATTAAGCAACTTGAACAGGAAATCAGAATTCTCCATCAATTACACCACCCCAACATTGTGCAGTATTATGGAAGTGAATTAGACGGCGATCGACTGTACATATATATGGAGTATGTTCATCCTGGATCACTTCATAAGTTTATGCATGAACATTGTGGAGCTATGACAGAGTCTGTGGTTCGCAACTTCACAAAACATATTCTCTCTGGATTGGCATACTTGCATAGTACCAAGACTATTCACAGGGATATCAAATGTGCAAACTTGTTGGTCGATGCATCGGGCATGGTTAAGCTTGCGGATTTTGGGGTGTCGAAAATTCTGACAGAGAAATCATATGAACTTTCATTGAAGGGTAGTCCATACTGGATGGCTCCGGAGCTCATGAAGGCTGCCATAAAGAAAGAATCCAGTCCTGACATTGCCATGGCCATTGATATATGGAGCTTAGGGTGCACTATTATCGAAATGCTGACAGGAAAACCTCCTTGGAATGAATATGAAGGGCCGCAAGCCATGTTCAAGGTACTGCACAAATCCCCAGATATACCTGAAAATTTGTCTCCAGACGGACAGGATTTCCTTCAACAGTGCTTCAGAAGGAATCCGGCAGATAGGCCATCGGCTGCAGTGCTTCTTACACATGCCTTTGTACAAAATTTGCACGATCAAGATGCTTTACTTCATTCACAAGTGCAAAGCTGCCCCAGAGGAGACCCCGGATCTGGAGATGATTCACGTAGACATAGCCCCGGTCACAGTTCAAAAAATAATAACCGTGTAGTTCCAGCCTCCATTGGCGCACGGTTTTTCCAAAAAATTCATAATTTAATAGGTGACACTTCGAAAAAATATGATAGCGAGGAATCTAATCATGTCACTTCTTCTCGTAACTCTTCCTGCTCGATGACAGAAGTAAACAGTCCTCAATCTCCCTTGAAATCCAGTACCCTCAATTACATGGGTGTGGCCAATTCCAGCAACATACCCCTCGCCACCGTTATGAGAATCATCAGGCACATTTGA 2046 0.4599 MSTANPNKPSSPPPTIKQRRLTRQGRLRHLTHKDSALHSTTSLPSSPLPSFKSTSASDHWSSSAVPQPLPRPDSPLTRRHDHHHLGSPPFEHPGFAFPRSVDHDAGRSLRSASNLGRPSFDPVVPNAKYDLRVNIPPARVLAGNTSSCKDHRELSHDNDSENVSNLRLHFSAKSAPNSIFSSPVTSPRRSSNVDFYDPSIIFPQDFNDILRVSPAKTAQSPDRSPLRSPGSHLNLEGCQSQLHKISSRVLPENNHVDAHPLPLPPRASPPPAQSSPQHQPSIVHIPSENSSSMKGQWQKGKLIGRGSYGSVYHATNLETGASCAMKEVEMFPDDPKSADSIKQLEQEIRILHQLHHPNIVQYYGSELDGDRLYIYMEYVHPGSLHKFMHEHCGAMTESVVRNFTKHILSGLAYLHSTKTIHRDIKCANLLVDASGMVKLADFGVSKILTEKSYELSLKGSPYWMAPELMKAAIKKESSPDIAMAIDIWSLGCTIIEMLTGKPPWNEYEGPQAMFKVLHKSPDIPENLSPDGQDFLQQCFRRNPADRPSAAVLLTHAFVQNLHDQDALLHSQVQSCPRGDPGSGDDSRRHSPGHSSKNNNRVVPASIGARFFQKIHNLIGDTSKKYDSEESNHVTSSRNSSCSMTEVNSPQSPLKSSTLNYMGVANSSNIPLATVMRIIRHI 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00429 681 Gene3D Transferase(Phosphotransferase) domain 1 287 632 - -
Spst9g00429 681 SMART serkin_6 297 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00429 681 ProSitePatterns Protein kinases ATP-binding region signature. 303 326 IPR017441 GO:0005524
Spst9g00429 681 ProSiteProfiles Protein kinase domain profile. 297 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00429 681 MobiDBLite consensus disorder prediction 262 276 - -
Spst9g00429 681 MobiDBLite consensus disorder prediction 36 64 - -
Spst9g00429 681 MobiDBLite consensus disorder prediction 1 122 - -
Spst9g00429 681 FunFam Mitogen-activated protein kinase kinase kinase 5 294 597 - -
Spst9g00429 681 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 61 584 - -
Spst9g00429 681 MobiDBLite consensus disorder prediction 277 297 - -
Spst9g00429 681 SUPERFAMILY Protein kinase-like (PK-like) 272 569 IPR011009 -
Spst9g00429 681 MobiDBLite consensus disorder prediction 254 297 - -
Spst9g00429 681 MobiDBLite consensus disorder prediction 632 653 - -
Spst9g00429 681 Pfam Protein kinase domain 298 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00429 681 MobiDBLite consensus disorder prediction 74 88 - -
Spst9g00429 681 MobiDBLite consensus disorder prediction 622 653 - -
Spst9g00429 681 MobiDBLite consensus disorder prediction 572 602 - -
Spst9g00429 681 MobiDBLite consensus disorder prediction 214 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00429 Spst-Chr9 3815424 3821019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00429 137 560 MAP Kinase Kinase Kinase AT5G66850 49.385 8.78e-147 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst9g00429 Pkinase 3.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00429 - - gmx:100781764 1105.12