Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00421 ATGGATTCCTCCTTGCAATTAACTATTGTAGCCATTTTGGTGTCCGTGTTGGTATTTCTCCGGCACGCTTTTCTTGGAAAGAAGAGAAATAAAGGAGGTAGTAACAATGGCAGAGAAGCTCCTGTCCCAACTGGTACATGGCCACTTATTGGTCACCTACACCTTCTGGGTGGTGATGACAAACTTCTCTACCGAACACTAGGAACAATGGCTGATAAATATGGACCTGCATTTAACATCTGGCTCGGAACTCGTAGAGCTTTCGTGGTTAGTAGCTGTGAAGTGGCTAAAGAATGTTTCACAACCAATGACAAGGCACTTGCCTCACGTCCAACAACAGTTGCCGCAAAGCTCATGGGCTACAACTACGCGGTGTTTGGTTTTGCCCCTTATAGTCCCTTTTGGCGTGAGATGAGAAAGATTGCAACTCTTGAGCTTCTTTCTAACCGCAGGATCGAAATGCTGAAGCATGTAAGAGTGTCGGAACTCAACATGGGCATAAGGGAGTTATACAACTCTTGGGTCCAAAACAGGTCTCAACCTGTGGTTGTTGAGCTGAACCGGTGGTTCGGGGATTTGACTCTGAACATGGTGGTTAGAATGGTGGCAGGAAAACGCTACTTTGGTGCCTCAGCAACTTGTGATGATGATGAAGCAAGGCGGTGCCAGAAGGCTATTAATCAGTTCTTCCATCTGATTGGGATTTTTGTGGTTTCGGATGCACTTCCGTTTCTGCGTTGGTTCGATGTGCAGGGGCACGAGGGAGAAATGAAGAAAACTGCCAAGGAGTTGGATGCCATACTTGAAGGGTGGCTACAGGAGCATCGTATGCAAAGAGTTGATGGTGAAGTTAAGGCAGAGGCTGAACAGGATTTCATTGATGTCATGTTGTCGCTTCAGAAGAGTGGTCACCTATCAAATTTCCAATATGATTCGGATACCAGCATCAAATCCACATGCCTAGCTATTATACTTGGTGGCAGTGAAACCTCAGCCGGCACGCTTACTTGGGCCATCTCATTACTCCTCAACAATCCTACAGCATTGAAAAAGGCCCAAGAAGAATTGGACCGGAATGTTGGCATGGATAGGCAAGTTGAGGAGTCAGATATTAAAAACCTTGAATATCTTCAAGCCATTATCAAGGAAACCTTGAGGCTATACCCAGCTGGGCCTCTCCTAGGACCAAGGGAAGCACAAGAAGATTGCAATGTTGCTGGTTATCATGTCCCTGCAGGCACCCGCTTGGTGGTCAACTTGTGGAAGATTCATAGGGATCCAAGGGTGTGGCAAGAGCCTTCTGCCTTCAGACCTGAGAGGTTTCTCACAAGTGATGGTGTTGATGTTAGAGGCCAAAACTTTGAACTCATTCCCTTTGGCTCTGGTAGAAGGTCATGTCCTGGAATGTCTTTTGCACTCCAAGTTCTTCACCTGACACTGGCTCGTCTGCTTCATGCGTTTGGATTTGCAACCCCATCAGATGAACCAGTTGACATGACTGAGAGCCCCGGTTTAACAATTCCGAAGGCAACTCCCTTGGAGGTTCTTCTTACTCCACGCCTTCCAACCCAATTATATACCTACTAA 1587 0.4669 MDSSLQLTIVAILVSVLVFLRHAFLGKKRNKGGSNNGREAPVPTGTWPLIGHLHLLGGDDKLLYRTLGTMADKYGPAFNIWLGTRRAFVVSSCEVAKECFTTNDKALASRPTTVAAKLMGYNYAVFGFAPYSPFWREMRKIATLELLSNRRIEMLKHVRVSELNMGIRELYNSWVQNRSQPVVVELNRWFGDLTLNMVVRMVAGKRYFGASATCDDDEARRCQKAINQFFHLIGIFVVSDALPFLRWFDVQGHEGEMKKTAKELDAILEGWLQEHRMQRVDGEVKAEAEQDFIDVMLSLQKSGHLSNFQYDSDTSIKSTCLAIILGGSETSAGTLTWAISLLLNNPTALKKAQEELDRNVGMDRQVEESDIKNLEYLQAIIKETLRLYPAGPLLGPREAQEDCNVAGYHVPAGTRLVVNLWKIHRDPRVWQEPSAFRPERFLTSDGVDVRGQNFELIPFGSGRRSCPGMSFALQVLHLTLARLLHAFGFATPSDEPVDMTESPGLTIPKATPLEVLLTPRLPTQLYTY 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00421 528 Gene3D Cytochrome P450 26 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00421 528 Pfam Cytochrome P450 43 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00421 528 PANTHER CYTOCHROME P450 82C3-RELATED 16 526 - -
Spst9g00421 528 FunFam Cytochrome P450 82C4 30 518 - -
Spst9g00421 528 CDD CYP82 75 520 - -
Spst9g00421 528 SUPERFAMILY Cytochrome P450 41 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00421 528 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00421 528 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00421 528 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00421 528 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00421 528 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00421 528 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00421 528 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00421 528 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00421 528 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00421 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Spst9g00421 528 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00421 528 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00421 528 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00421 528 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00421 Spst-Chr9 3758143 3760114 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00421 1 527 Cytochrome P450 AT4G31940 66.041 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00421 K23136 - gmx:100811993 934.865