Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00420 ATGGAGGCAACAGCTCTTGCTGGAGTACCTCTCTTACTATTAATCTGTTACTTCATCAAACGGGCTACAGCAGGTTCTGCTCGCAGGCCACCGGAAGCCGCCGGTGCCTGGCCTTTGATCGGCCACCTTCACTTCTTTGGTCGCTCCGGTCAGCCTCTTTACGAAACCCTGGGAGGTTTCGCAGACAAGTATGGCCCAATATTCAGCATGCGTATCGGTGTGCATCACGCTGTAGTGGTGAGCTCGTGGGAGTTGGCGAAGGAGTGTTTCACCACTCTCGACGTGGTTGTTTCCTCTCGTCCCAAATACACCGCTGCAAAAATCTTGACATACGACTATGCTAGTTTTGCGTTCTCCCCTTACGGAGATTTCTGGCGCGACATGCATAAGATTACGGTTTCGGAGCTACTTTCTACTCGACGTGCCGAGCTGCTTCGAGAAATTAGAGATTCGGAGGTGCAGAGCTCGTTGAAAGAACTATACAGAACGTGGGTGGAGAAAAGAGGTGATTCGTTGGTGGAGATGAAGCAGTGGTTCGGGAAAATAAATCTGAACGTGATTCTGAGGATGGTTGGGGGAAAGCGATACTGCGTAGGGAGTGGAGATGAGGAACGGGCGAGGCGGGTTCGGGGGGTACTAAGAAAGTTCTTTGATTTGCTGGGGGTGGTTGTGATTGGGGATGCGATTCCGTTTCTTGGGTGGCTTGATTTGGGAGGTAAAATGAAGGAGATGAAAAAAACGGCTGTAGAAATAGATAGTTTCGTTTCTGAATGGTTAGAAGAACATCGCCAACAAAGAGACTCAGATGAGAAGAAAAGAGAGGAAGACTTCATTGATGTGTTGGAGTCTGCTATTGACGGGGTCGACCTTGCTGGTTATGATGCCAACACTGTCATTAAAGCCACATGCTTGACGTTAATTGCTGCAGGAACGGATACTATAACAATAACTCTGACTTGGGCACTATCGTTATTGTTGAATAATCGTGATGCCTTGAAGAAAGCTCAAGATGAATTAGATGTGCATGTGGGCAAGGAAAAACTGGTGAATGAATCTGACATAAACAAATTAGTTTACCTTCAAGCTGTGGTTAAAGAGTCAATGAGATTGTATGCAGCTGCACCACTTCCAAGTCCGCGTGAATTCACAAGCGATTGTACCTTAGGTGGCTACCAAATCCAAGCGGGTACCAGATTTATTTTGAACATTTGGAAGATGCAAAGAGACCCGCGTGTGTGGCCAAATCCATTGGAGTTTCAACCAGAAAGGTTCCTCACCACCCACAAGGATGTGGATGTGAAGGGTCAACATTTTGAGCTACTTCCCTTTGGCGGTGGAAGAAGGTCGTGTCCTGGAATGTCAGTCGGCCTTCAAATGACACACTTGGCTTTAGCAGCTTTTTTGCAAGCATTTAAAGTCACAACCTTGAACAATGAAAAAGTTGACATGAGTGCCGTATTTGGACTCACACTCATCAAAGCCACCCCACTTGAGGTTCTAATCGAACCTCGTTTACCATATCAGCTTCTGGTTAGTGATGAAACTAAGGAAAATCCACTGCCTTAA 1566 0.4668 MEATALAGVPLLLLICYFIKRATAGSARRPPEAAGAWPLIGHLHFFGRSGQPLYETLGGFADKYGPIFSMRIGVHHAVVVSSWELAKECFTTLDVVVSSRPKYTAAKILTYDYASFAFSPYGDFWRDMHKITVSELLSTRRAELLREIRDSEVQSSLKELYRTWVEKRGDSLVEMKQWFGKINLNVILRMVGGKRYCVGSGDEERARRVRGVLRKFFDLLGVVVIGDAIPFLGWLDLGGKMKEMKKTAVEIDSFVSEWLEEHRQQRDSDEKKREEDFIDVLESAIDGVDLAGYDANTVIKATCLTLIAAGTDTITITLTWALSLLLNNRDALKKAQDELDVHVGKEKLVNESDINKLVYLQAVVKESMRLYAAAPLPSPREFTSDCTLGGYQIQAGTRFILNIWKMQRDPRVWPNPLEFQPERFLTTHKDVDVKGQHFELLPFGGGRRSCPGMSVGLQMTHLALAAFLQAFKVTTLNNEKVDMSAVFGLTLIKATPLEVLIEPRLPYQLLVSDETKENPLP 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00420 521 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00420 521 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00420 521 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00420 521 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00420 521 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00420 521 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00420 521 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00420 521 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00420 521 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00420 521 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00420 521 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00420 521 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00420 521 SUPERFAMILY Cytochrome P450 35 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00420 521 PANTHER CYTOCHROME P450 82C3-RELATED 11 508 - -
Spst9g00420 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Spst9g00420 521 Pfam Cytochrome P450 35 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00420 521 CDD CYP82 65 504 - -
Spst9g00420 521 Gene3D Cytochrome P450 25 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00420 521 FunFam Cytochrome P450 82C4 20 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00420 Spst-Chr9 3755689 3757560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00420 31 511 Cytochrome P450 AT4G31940 51.626 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00420 - - gmx:100779080 841.647