Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00415 ATGATCACCAAACAAAACCACCCACTTTTGTTGCTCACCTTGGTATTGGGTGAATTAATATTTTTCATTGCAATAACCACTGCCCAAGTGAACAACCAGGAGTGCCGCCAAACATGCGGTTCCTCCGAGCCCTTCCCTTACCCTTTCGGATTCTCCTCCGGCTGCGTAATCCGTTTGAATTGCACGGGCGGCAGAGCCTCCGTTGGAGAATTCCCGGTGCAAAAGGTGAGCGTGTACAACATCATCGTGAACATCGAAGCTCGGTGCAATCGTCCATTCGATAGTTTTCACCAACTCTTCAGCCACAAATACGCGCCCACTTGGCGAAACGTGATTCTCTTAGATAACTGTACCGGAACGCCCTTACCCTGCTCCATACCGGAGAATCTGGTGCGGACCCATTTCGAATCCGCGGGGTGCAGCACCACAGGAACGGGCAATTTGAGTTGCTACTTCGAGAACATAACTAACGGTTTCGTGAATCGCCGAAAATTGGACCCAATCGGGTGCAACTACTTCATATCGTCTCTTTCATCACCCGATGTTAAAAACGTTTCCGGTGAGCCTCTGTCTTTGGATGTAAATACAATCGAACTTGGCTGGTGGGTCAAGGGAGATCGATGTCTATGTTCCGATCACGCCAATTGCACCGTGCTTCAATCCCCGGTTGACGGAAAGGCCGGTTTCCGCTGTAGCTGCCGCGAAGGCTTCGTCGGCGATGGATTTTTGGCCGGAACCGGTTGCCGCAAAGCCTCGTCATGCAACCCAGCCAAGTACTTATCTGGCCGATGTGGAGGAACAACGAGATTCATTGTCTTAATCGGAGGGTTTGTGATTGGCGTATCGCTGATTGTTACCGCGTGTTCACTATGTTGTTTCTTCCGCCGGCGCTCCAAATTGAGAGTCACAAAGAGCACGAAAAGGAGATTAACCGAAGCCACCGGCAACAATGGTGTTCCTATATATCCCTACAAAGACATTGAGAGAGCCACGAATAGTTTCTCAGAGAAACAACGGTTGGGAACTGGGGCGTACGGAACGGTTTATGCTGGGAAATTGTACAGCGATGAATGGGTTGCCATCAAAAGAATAAAACACGGAGACACAGACAGTATTGAGCAGGTAATGAACGAGATCAAGCTCCTTTCCTCTGTGAGCCACACCAACTTAGTTCGCTTGTTGGGTTGCTCCATTGAATACGGAGAACAAATCCTGGTGTACGAGTTCATGCCCAACGGAACACTGAGTCAGCATTTGCAGAAAGAGAGAGGGAACGGTCTTCCTTGGGCGGTTCGACTGACGATTGTCACTGAAACCGCACAAGCCATCGCACATCTTCATTCAGCCATTAGCCCCCCCATTTACCACCGAGACATTAAGTCCAGCAACATACTTTTGGACTACAATTTCAGGTCAAAAGTGGCAGATTTTGGTCTTTCTAGACTTGGAATGACCGAAACATCGCACATTTCAACTGCCCCACAAGGAACTCCTGGCTATGTCGATCCACAATACCATCAAGATTTTCATCTCTCTGACAAGAGTGATGTTTATAGTTTTGGTGTTGTTCTTGTTGAGATCATCACGGGGCTAAAAGCGGTAGACTTTTCACGTCCGCATAATGAAGTGAACTTGGCTTCTCTTGCTGCAGATAGGATTGGAAAAGGGCTTTTGGATGAGATTATAGACCCATTCCTTGAACCCGAAGCAAAGAGTGATGCTTGGACCCTTTCCTCCATACACAAGGTGGCTGAGTTGGCATTTAGATGCCTAGCGTTCCACAGGGACATGAGGCCTTCGATGACTGAAGTGGCTTGTGAATTAGAGCAACTTAGATTGAGTCAATGGACAACATTGGGAGACAACAATTGTGCAACCTCAACGGAGTTGTCCTCTTGTTCTTCCTCCTCCAATGAAAGTGAGAAACCACTGAGTACCACAAAGAACGTTGGAGCAAAGGGTAAAGGGTACCTTAAGATCCAAACTAGGCCTATTCCTTTAAAATCATTACAAAGGCCTAATAGTAATTCACCAGTCTCGGTGCAGGACCAAGAGTTATGGTTGAGTGAACAGAGTTCTCCTTCATCAAATAGTTTTCCAAGCAAGCCATTTGATTGA 2118 0.4754 MITKQNHPLLLLTLVLGELIFFIAITTAQVNNQECRQTCGSSEPFPYPFGFSSGCVIRLNCTGGRASVGEFPVQKVSVYNIIVNIEARCNRPFDSFHQLFSHKYAPTWRNVILLDNCTGTPLPCSIPENLVRTHFESAGCSTTGTGNLSCYFENITNGFVNRRKLDPIGCNYFISSLSSPDVKNVSGEPLSLDVNTIELGWWVKGDRCLCSDHANCTVLQSPVDGKAGFRCSCREGFVGDGFLAGTGCRKASSCNPAKYLSGRCGGTTRFIVLIGGFVIGVSLIVTACSLCCFFRRRSKLRVTKSTKRRLTEATGNNGVPIYPYKDIERATNSFSEKQRLGTGAYGTVYAGKLYSDEWVAIKRIKHGDTDSIEQVMNEIKLLSSVSHTNLVRLLGCSIEYGEQILVYEFMPNGTLSQHLQKERGNGLPWAVRLTIVTETAQAIAHLHSAISPPIYHRDIKSSNILLDYNFRSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKAVDFSRPHNEVNLASLAADRIGKGLLDEIIDPFLEPEAKSDAWTLSSIHKVAELAFRCLAFHRDMRPSMTEVACELEQLRLSQWTTLGDNNCATSTELSSCSSSSNESEKPLSTTKNVGAKGKGYLKIQTRPIPLKSLQRPNSNSPVSVQDQELWLSEQSSPSSNSFPSKPFD 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00415 705 Gene3D Phosphorylase Kinase; domain 1 295 409 - -
Spst9g00415 705 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Spst9g00415 705 SMART serkin_6 334 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00415 705 FunFam Wall-associated receptor kinase-like 14 isoform A 208 243 - -
Spst9g00415 705 MobiDBLite consensus disorder prediction 628 705 - -
Spst9g00415 705 Pfam Protein kinase domain 334 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00415 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Spst9g00415 705 Gene3D Laminin 209 243 - -
Spst9g00415 705 FunFam Wall-associated receptor kinase-like 14 301 409 - -
Spst9g00415 705 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 21 649 IPR044652 GO:0004672
Spst9g00415 705 ProSiteProfiles Protein kinase domain profile. 334 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00415 705 MobiDBLite consensus disorder prediction 628 647 - -
Spst9g00415 705 FunFam Wall-associated receptor kinase-like 20 410 620 - -
Spst9g00415 705 Gene3D Transferase(Phosphotransferase) domain 1 410 629 - -
Spst9g00415 705 SUPERFAMILY Protein kinase-like (PK-like) 313 609 IPR011009 -
Spst9g00415 705 MobiDBLite consensus disorder prediction 667 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00415 Spst-Chr9 3701909 3706366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00415 1 699 Receptor kinase-like Gene Family AT2G23450 50.423 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Spst9g00415 Pkinase 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00415 - - gmx:100777480 1179.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00415 9 3701909 3706366 Spst9g00415 9 3701909 3706366 ECH