Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00369 ATGAAATGGTCTAGAGAAAGGATATATCGTACTCGATTGATGGGTTGGACACGCGAAGAGAATAGACGTTTTGAGGATGCTCTTGCGGTTCATGGCCCTGACGACCCAAATCGGTGGCAACATGTAGCCAACGCCGTGGGTGGAAAATCCGTAGAAGAGGTGAAAATGCACTATGAGATCCTCAAGGAAGATGTCATTCGAATAGAGCGTGATCAAATCCCACTACCCAGGTACAGAGGTGCTGGCATCAACGGAAGACACATTGACAATGAGCAAAGGCGAATGAGGAATCTGACTCTGCGGTGA 306 0.4804 MKWSRERIYRTRLMGWTREENRRFEDALAVHGPDDPNRWQHVANAVGGKSVEEVKMHYEILKEDVIRIERDQIPLPRYRGAGINGRHIDNEQRRMRNLTLR 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00369 101 SMART sant 12 64 IPR001005 -
Spst9g00369 101 CDD SANT 16 62 IPR001005 -
Spst9g00369 101 FunFam Transcription factor SRM1 10 75 - -
Spst9g00369 101 Gene3D - 15 63 - -
Spst9g00369 101 ProSiteProfiles Myb-like domain profile. 16 62 IPR001005 -
Spst9g00369 101 SUPERFAMILY Homeodomain-like 16 69 IPR009057 -
Spst9g00369 101 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Spst9g00369 101 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 14 86 IPR044636 GO:0003700
Spst9g00369 101 Pfam Myb-like DNA-binding domain 16 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00369 Spst-Chr9 3342171 3343546 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Spst9g00369 Myb_DNA-binding 1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00369 - - gmx:100789698 163.31