Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00354 ATGTTTCTTCAATCGGTAACGGAGCATCCTTACCTTTGCTTCCATGTTAGTGTCTTGTGTTTTTTATTATGTCAAAAAGCATGGGCACTTTGGTGTAGAAACAAGCCCTCTGTGGGCAATATTCCTCCGGGAAATCGAGGATTTCCCTTCGTAGGAGAGACACTTCAGTTCATGGCTGCCATCAACAACACCAAAGGAGTCTATGAATTTGTCCAAGTTCGCCGCCTCCGGTATGGGAAATGCTTCAAGACGAAGCTATTTGGGGAAACGCACGTTTTCATATCGAGCACGGAGTCAGCAAAAGTGATTCTAAACAACGAGGGTGGGAAATTCTCCAAGAGTTATATGAAGTCGATCGCCGAGCTTGTTGGGCGCGATAGCTTGCTCTGTGCTGCACATCAACATCATAAACTCATTCGCGCCTCTCTCTTCACTTTGTTCTCGACAGATTCTCTCTCTTCCTTGGTTAAACTCTTTGATTCACTCGTTCTTCAAGCTACCACTAGTTGGAAATCTGGATCTCTCCTCGTCATTCAAGATGAAACACTCAAGCTGGCTTGTAAGGCGATGTGCAACATGTTAATAAGCATCGAGAATGGCTACGAATTAGAGACGATGCAAACTGAGGTTGCTCGTTTGGGTGAAGCAATGCTAGCCTTACCCGTCAGGTTACCCTGGACCAGATTCTACAAAGGCCTTCAGGCTCGAAAAAGGATAATGGACATTTTGGAGAAGCATATGAGTGAAAGAAGAAGTGGAATTGCAACTAGCCATGTAGATTTTCTTCAACAACTTTTAGATGATAAATTAAACGAGGATAGAGTCCCAAGGCTAACAGACTCAGAGATTAAAGACAACATCTTAACTATGATAATTGCAGGACAAGACACGATAGCAAATGCAATGACATGGATGATCAAATTTGTGGATGAGAATCAGCAAGTTTTTAATACCCTTATGAAGGAGCAACTTGAGATTGAGAAGAATGGTTCAAGAAATTCACATCTTACACTAGAGGCCCTTAATGAGATGCCATACGCTTCTAAGGTAGTAAAAGAAGCATTAAGGAAGGCATCTGTGGTACAGTGGTTGCCTAGAGTAGCACTCGAGGACTGTGTCGTAGAAGGATATAAAATCAAGAAAGGGTGGAACATTAACATCGATGCTAAATCGATACACCATGATCCAACTGTGCACAATGATCCGGGTGTGTTCAATCCTTCAAGATTTCATGCAGAGTCAAAACCATACAGCTTCTTAGCTTTTGGGATGGGAGGAAGGACATGCCTAGGAAAGAACATGGCTAAAGCCATGATGTTGGTGTTTCTCCACCGTTTCATCACCAATTGCAAGTGGAAGGTGATTGATTCTGACTCAAGTATTCAGAAGATGGCACTTTTTACAAAACTTAAGAGTGGATATCCTGTACGTTTGATCTCAATTAGGGATGTCAAAAACAAAACCTTGTGA 1470 0.4231 MFLQSVTEHPYLCFHVSVLCFLLCQKAWALWCRNKPSVGNIPPGNRGFPFVGETLQFMAAINNTKGVYEFVQVRRLRYGKCFKTKLFGETHVFISSTESAKVILNNEGGKFSKSYMKSIAELVGRDSLLCAAHQHHKLIRASLFTLFSTDSLSSLVKLFDSLVLQATTSWKSGSLLVIQDETLKLACKAMCNMLISIENGYELETMQTEVARLGEAMLALPVRLPWTRFYKGLQARKRIMDILEKHMSERRSGIATSHVDFLQQLLDDKLNEDRVPRLTDSEIKDNILTMIIAGQDTIANAMTWMIKFVDENQQVFNTLMKEQLEIEKNGSRNSHLTLEALNEMPYASKVVKEALRKASVVQWLPRVALEDCVVEGYKIKKGWNINIDAKSIHHDPTVHNDPGVFNPSRFHAESKPYSFLAFGMGGRTCLGKNMAKAMMLVFLHRFITNCKWKVIDSDSSIQKMALFTKLKSGYPVRLISIRDVKNKTL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00354 489 SUPERFAMILY Cytochrome P450 40 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00354 489 CDD CYP90-like 74 478 - -
Spst9g00354 489 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00354 489 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00354 489 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00354 489 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00354 489 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00354 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Spst9g00354 489 PANTHER CYTOCHROME P450 26 41 456 - -
Spst9g00354 489 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00354 489 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00354 489 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00354 489 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00354 489 Gene3D Cytochrome P450 33 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g00354 489 Pfam Cytochrome P450 42 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00354 Spst-Chr9 3265626 3268425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00354 19 452 Cytochrome P450 AT1G19630 56.532 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00354 - - lang:109327951 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00354 9 3265626 3268425 Spst9g00354 9 3265626 3268425 ECH