Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00351 ATGGAAGCCCCTAAGTGTATCTATCGTGGGCAAGCAGTGAGCATTCCACCAAGTGCTCCTACCCCAAAACATTCTCTCTATTTGTCCAATCTTGACGACCAAAAGTTCCTCAGGTTCTCCATCAAGTACTTGTTCCTCTTCAACAAGTCCATGAGCTTGGATGTGTTGAAGTCTTCTCTGGGTAGAGTTCTAGTGGATTATTACCCCTTAGCTGGCAGATTGAGGAGCGTCGATGATCACAAGCTTGAGGTGGATTGCAATGGACAAGGTGCTCTCTTTGCTGAGGCTTTCACTCACACCACTGTTCATCAACTACTCGAATCCTCCAAGACTCCCAACAAGTCTTGGAACAAGTTCTTGTATAAGGTCGAAGCTCACAGTTTCGTCGATGTTCCTCCTCTTATAGTCCAGGTAACGAGCCTAGGTTGCGGGGGAATGATACTCTGCACCGCGATCAACCACTGCGTATGCGACGGCATAGGCACGTCTCAGTTCCTACACGCTTGGGCACAACTAACGAAAAAGCCCGAAGCGGAATTGACAATCGTGCCCTTTCACTGGCGCCACGTGCTGAAACCCAGAGAGCCCGCGCAGGTAAAGTTCCGTCACGCGGGGTACACCGCACCAAACCCAAACCCAAACCCAACCCCAACCTCTCAAGTGGACCTGATGAAGTTGATACAGTCACACCCCTTGGTACCCACGTCCTTCACCCTCACCCCCGACCACGTCCTTCGCCTCAAGAAACAGTGCGTGCCCTCCCTGAAGTGCACGTCCTTCGAAACCGTGGCGGCGCACACGTGGCGGTCTTGGGTTCGGTCACTAAACCAATCCCTACCGTCGAAACTCCTGGTGAAGCTCCTTTTCTCTGTGAACGTTAGAGCAGTGGTTGACCTTCCGCAAGGGTATTACGGAAACGGGTTCTTACTAGCGTGCGCCGAGAGCAGCGTAGAGGAGTTAGTGGAGGAGGGTAACCTGCGCCACGGTGTGAAGCTTGTGCAGGAAGCGAAGGCGAGGTTGAAAGACGAGGACTATATACGGTCAATGGTTGACTTGTTGGAGGACAAAACGGTGAAAACGGATCTTTGTACGAGTTTGGTTATTTCGCAGTGGTCTAAACTGGGGTTGGAAGAGGTGGATTTTGGGGAAGGGAAACCTTTGCATATGGGTCCTTTGACCAGCGATATTTACTGCTTGTTTTTACCGGTTCCCGGTGACGCTAATGCGGTGAGAGTGCTGGTGTCTCTTCCCGATAACATGGTGGAACCTTTTCAGTATCACATGCAAGAATGTTCCCAAGAAAAAGAATAA 1311 0.5095 MEAPKCIYRGQAVSIPPSAPTPKHSLYLSNLDDQKFLRFSIKYLFLFNKSMSLDVLKSSLGRVLVDYYPLAGRLRSVDDHKLEVDCNGQGALFAEAFTHTTVHQLLESSKTPNKSWNKFLYKVEAHSFVDVPPLIVQVTSLGCGGMILCTAINHCVCDGIGTSQFLHAWAQLTKKPEAELTIVPFHWRHVLKPREPAQVKFRHAGYTAPNPNPNPTPTSQVDLMKLIQSHPLVPTSFTLTPDHVLRLKKQCVPSLKCTSFETVAAHTWRSWVRSLNQSLPSKLLVKLLFSVNVRAVVDLPQGYYGNGFLLACAESSVEELVEEGNLRHGVKLVQEAKARLKDEDYIRSMVDLLEDKTVKTDLCTSLVISQWSKLGLEEVDFGEGKPLHMGPLTSDIYCLFLPVPGDANAVRVLVSLPDNMVEPFQYHMQECSQEKE 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00351 436 Pfam Transferase family 15 429 - -
Spst9g00351 436 Gene3D - 219 430 IPR023213 -
Spst9g00351 436 Gene3D - 9 208 IPR023213 -
Spst9g00351 436 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 426 - -
Spst9g00351 436 SUPERFAMILY CoA-dependent acyltransferases 39 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00351 Spst-Chr9 3244464 3247297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00351 17 431 Monolignol Biosynthesis Gene Families AT5G48930 28.604 1.23e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00351 - - var:108341288 760.755