Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00349 ATGCAAGAAAGAAAGAGAAGAGAAAATGAGAAGATAGTGCGAGGTGGAAGTACTGGAGCAAAACCCGGGTGTGTGACTTTCGTTAGGGAGAGAGAGAAAGACATATGTAGTTTCATTCAGAAACTCCAAACATCTGAGGCGACAACATTAGGAATCTCGATCGCTGATAAAACCTATGCAGCCCCAAACACACTCTGCATTCCAACTTGTTTAAATTCCCTTTTTCCGATTCACCCTTCTCTCAATAAATTTTGGGCCTATGAAACCCGATTCTTCGCCACCGAAATGGCTACTCCTGTTGATCCTCCAAATGGGATCAGGACTGAAGGGAAGCATTATTTCTCCATGTGGCAAACCCTGTTTGAGATTGATTCAAAATACGTGCCAATCAAGCCCATTGGTCGCGGAGCATACGGGGTTGTGTGCTCGTCTGTGAATAAGGACACCAATGAGAAGGTTGCCATCAAGAAAATACAGAACGCCTTTGAAAACCGGGTTGATGCGCTGAGGACTTTGCGCGAACTCAAGCTTCTTCGCCACCTTCACCATGAGAATGTGATTGCTTTGAAGGACATCATGATGCCTGTTCATAGGAATAGTTTCAAGGATGTCTATCTGGTTTATGAACTCATGGACACGGATTTGCACCAGATTATTAAGTCTTCTCAAGCACTGTCTAATGATCACTTCCAGTATTTCCTCTTTCAGTTGCTTCGTGGCTTGAAATATCTTCATTCTGCTAACATCCTTCATCGTGACTTGAAACCTGGGAATCTTCTAATCAATGCAAATTGTGACCTAAAAATATGTGATTTCGGGTTAGCACGAATTAACTGCAGCAAGAACCAGTTCATGACCGAGTATGTTGTCACACGTTGGTACAGGGCACCAGAGCTCCTACTCTGCTGTGACAACTACGGGACATCCATTGATGTTTGGTCAGTTGGATGCATCTTTGCCGAGCTTCTTGGCCGAAAACCGATTTTCCCGGGTTCAGAGTGTCTCAACCAACTGAAATTGATTATCAATATCCTTGGTAGTCAAAAGGAGGAAGATATTGAGTTCATTGATAATGCAAAGGCAAAGAAGTATATCAAATCACTTCCTTCTTCTCCTGGAACCCCCTTTTCACGACTTTATCCTAATGCACATCCTTTAGCAATTGACCTTCTGGCAAAGATGCTTGTTTTCGATCCAACAAAGAGGATCAGTGTCACTGAAGCGCTTCAACACCCTTACATGGCCCCTCTCTATGATCCTAACTGTGACCCCCCAGCTGTGATTCCAATTGATCTTGACATTGATGAGGATCTAGGGGAAGAGATGATAAGAGAGATGATGTGGAAAGAAATGCTTCATTACCATCCTGAATCTGCTATGGAGAGTGCAGGGTTGTGCTAA 1401 0.4354 MQERKRRENEKIVRGGSTGAKPGCVTFVREREKDICSFIQKLQTSEATTLGISIADKTYAAPNTLCIPTCLNSLFPIHPSLNKFWAYETRFFATEMATPVDPPNGIRTEGKHYFSMWQTLFEIDSKYVPIKPIGRGAYGVVCSSVNKDTNEKVAIKKIQNAFENRVDALRTLRELKLLRHLHHENVIALKDIMMPVHRNSFKDVYLVYELMDTDLHQIIKSSQALSNDHFQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARINCSKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQKEEDIEFIDNAKAKKYIKSLPSSPGTPFSRLYPNAHPLAIDLLAKMLVFDPTKRISVTEALQHPYMAPLYDPNCDPPAVIPIDLDIDEDLGEEMIREMMWKEMLHYHPESAMESAGLC 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00349 466 FunFam Mitogen-activated protein kinase 113 221 - -
Spst9g00349 466 ProSiteProfiles Protein kinase domain profile. 127 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00349 466 CDD STKc_TEY_MAPK 121 456 - -
Spst9g00349 466 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 126 429 - -
Spst9g00349 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Spst9g00349 466 Gene3D Transferase(Phosphotransferase) domain 1 211 440 - -
Spst9g00349 466 Pfam Protein kinase domain 128 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00349 466 ProSitePatterns MAP kinase signature. 162 265 IPR003527 GO:0004707|GO:0005524|GO:0006468
Spst9g00349 466 SMART serkin_6 127 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00349 466 FunFam Mitogen-activated protein kinase 211 440 - -
Spst9g00349 466 Gene3D Phosphorylase Kinase; domain 1 114 450 - -
Spst9g00349 466 ProSitePatterns Protein kinases ATP-binding region signature. 133 157 IPR017441 GO:0005524
Spst9g00349 466 SUPERFAMILY Protein kinase-like (PK-like) 119 421 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00349 Spst-Chr9 3227699 3230004 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00349 96 459 MAP Kinase Gene Family AT1G10210 86.264 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Spst9g00349 Pkinase 2.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00349 K20535 - gmx:100798863 726.857