Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00348 ATGGCCTCATCAAGTGGAAACTCTTCTATTTGCACCAAGATTCAAAGCTCGGGGTCTGAAGAAGATTTGCAGGTTCTCAGGACAGACGAGAGGAAGAACAAGAGAAAGCTGTCGAATCGAGAATCTGCGAGAAGATCTCGGATGCGCAAGCGTAACCACTTGGAAGATCTCACGAAGCAAGTGTCACAGTTCACAAAAGAGAACAGGGAAATCCTCGGGACCATAGACATGACCACACAACACTATCTGAAAATTGAGGCAGAGAATTGTGTTCTGAGGGCCCAAATGGGTGAGCTTGGCCAACGACTCCAATCGCTGAACGACATCATCGTCGACATCATCAATCACACAACCACCTCCTACGAAAGGGACTGTTATCTAACAAGTGCACAAAATTTCACCAACACCCGCTGTTTCCACCAACCCGTTTTTCAGTGGTGA 441 0.4717 MASSSGNSSICTKIQSSGSEEDLQVLRTDERKNKRKLSNRESARRSRMRKRNHLEDLTKQVSQFTKENREILGTIDMTTQHYLKIEAENCVLRAQMGELGQRLQSLNDIIVDIINHTTTSYERDCYLTSAQNFTNTRCFHQPVFQW 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00348 146 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Spst9g00348 146 MobiDBLite consensus disorder prediction 1 22 - -
Spst9g00348 146 Coils Coil 40 60 - -
Spst9g00348 146 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Spst9g00348 146 Gene3D - 29 82 - -
Spst9g00348 146 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Spst9g00348 146 FunFam BZIP transcription factor 29 80 - -
Spst9g00348 146 MobiDBLite consensus disorder prediction 23 37 - -
Spst9g00348 146 SUPERFAMILY Leucine zipper domain 31 85 IPR046347 GO:0003700|GO:0006355
Spst9g00348 146 PANTHER BZIP TRANSCRIPTION FACTOR 44 15 125 - -
Spst9g00348 146 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Spst9g00348 146 MobiDBLite consensus disorder prediction 1 60 - -
Spst9g00348 146 Pfam bZIP transcription factor 31 86 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00348 Spst-Chr9 3223776 3224216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00348 25 124 bZIP Transcription Factor Family AT2G18160 56.000 2.83e-32 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst9g00348 bZIP_1 1.4e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00348 K25786 - gmx:778188 216.853