Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00328 ATGCCCAGGCTTGGATTTTCCACTCTGGTGGAGAAGTTTTCACCATCTTCTATGCGGTCAGGAGTGGTGGCATCTGGAATTGCCTTCGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCTGTGTTCGTAGCTGTGTATCAACCTGTTCAAACTCTTGTTGTCGCGATTATGGCTTCCCTTGCTTTAGGCGAAGAGTTCTACTTGGGAGGCTTAGAAGCCCAAATTGCTGAGTTGGGTTACACCCATTTTTCATCCAAGTGGGAGTTTGTGGGTGATGGAAAGGTTTCAAAGTTGTATTATGAGGCCCGTGTAAAAGCCATGGACCTCTTGCTTCCTAAATGA 345 0.4725 MPRLGFSTLVEKFSPSSMRSGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASLALGEEFYLGGLEAQIAELGYTHFSSKWEFVGDGKVSKLYYEARVKAMDLLLPK 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00328 114 PANTHER WAT1-RELATED PROTEIN 19 80 IPR030184 GO:0016020|GO:0022857
Spst9g00328 114 SUPERFAMILY Multidrug resistance efflux transporter EmrE 20 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00328 Spst-Chr9 3105506 3110602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00328 18 72 Nodulin-like Gene Family AT1G75500 89.091 1.00e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00328 - - csin:114280911 105.145