Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00310 ATGTCGGAAACGATGAGCAAAAACGACGTCGGATTGACGTCCACGACGTCGAGAAGGTTCTGGCCTCGTTGGATTCCCACTTCCATCGATCATATCATCGCTTCCGAGAAGCGCCTTCTCTCCGTCGTCAAAACCGGTTATGTTCAAGAGCATGTTAACATAGGTTCTGGTCCTCCTGGCTCCAAAGTGAGATGGTTCCGTTCAGCCAGTAACGAGCCGCGGTTTATTAACACCGTTACATTTGACAGTAAACCTGATTCTCCTACGCTTGTGATGATTCATGGTTATGCTGCTTCCCAGGGGTTCTTTTTTCGCAATTTTGATGTGCTTGCCTCTCGATTTAGAGTCATTGCTGTTGATCAACTTGGATGGGGTGGATCAAGCAGACCTGATTTTACTTGCAAAAGCACTGAAGAAACTGAAGCATGGTTCATTGATTCTTTTGAGGAATGGAGAAAAGCCAAAAACTTGAGCAATTTTATACTACTTGGACATTCTTTTGGTGGTTATGTTGCTGCTAAATATGCGCTCAAGCACCCTGAGTATGTACAACACTTGATTCTGGTTGGATCTGCTGGATTTTCATCAGAATCAGATACAAAGTCTGAGTGGGTTACAAGGTTTCGAGCAACATGGAAGGGAGCAGTTCTGAACCATCTATGGGAATCTAATTTTACACCTCAAAAACTTGTCAGAGGTTTAGGTCCTTGGGGTCCCAACATAGTCCGCAGGTATACAAGTGCTAGGTTTGGTACACATTCCACTGGTGAAATACTGACGGAAGAGGAATCAACATTGCTGACAGATTATGTTTACCACACATTGGCGGCCAAAGCTAGCGGGGAGCTGTGCTTAAAATATATTTTTTCATTTGGAGCATTTGCTAGAATGCCCCTTCTGCTCAGTGCCTCTGAGTGGAAGGTGCCCACTACTTTCATGTATGGTTTCCAAGACTGGATGAATTATCAAGGTGCCCAAGAAGCTCGTAAGCATATGAACGTTCCATGCGAAATCATCAGGATTCCTCGGGCCGGGCACTTTGCGTTCATTGACAACCCAACTGCCTTCCATTCAGCTATTTTTTATGCTTGTCGAAGATTTTTTTCACCTGATCCAGACAATGAACCTCTTCCTGAAGGGTTAACCTTTGCATAG 1155 0.445 MSETMSKNDVGLTSTTSRRFWPRWIPTSIDHIIASEKRLLSVVKTGYVQEHVNIGSGPPGSKVRWFRSASNEPRFINTVTFDSKPDSPTLVMIHGYAASQGFFFRNFDVLASRFRVIAVDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEYVQHLILVGSAGFSSESDTKSEWVTRFRATWKGAVLNHLWESNFTPQKLVRGLGPWGPNIVRRYTSARFGTHSTGEILTEEESTLLTDYVYHTLAAKASGELCLKYIFSFGAFARMPLLLSASEWKVPTTFMYGFQDWMNYQGAQEARKHMNVPCEIIRIPRAGHFAFIDNPTAFHSAIFYACRRFFSPDPDNEPLPEGLTFA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00310 384 PRINTS Alpha/beta hydrolase fold signature 162 175 IPR000073 -
Spst9g00310 384 PRINTS Alpha/beta hydrolase fold signature 176 189 IPR000073 -
Spst9g00310 384 PRINTS Alpha/beta hydrolase fold signature 113 128 IPR000073 -
Spst9g00310 384 PRINTS Epoxide hydrolase signature 308 324 IPR000639 GO:0003824
Spst9g00310 384 PRINTS Epoxide hydrolase signature 341 363 IPR000639 GO:0003824
Spst9g00310 384 PRINTS Epoxide hydrolase signature 176 189 IPR000639 GO:0003824
Spst9g00310 384 PRINTS Epoxide hydrolase signature 113 128 IPR000639 GO:0003824
Spst9g00310 384 PANTHER RE40534P-RELATED 17 361 - -
Spst9g00310 384 FunFam Probable 1-acylglycerol-3-phosphate O-acyltransferase 74 364 - -
Spst9g00310 384 Pfam alpha/beta hydrolase fold 88 204 IPR000073 -
Spst9g00310 384 SUPERFAMILY alpha/beta-Hydrolases 78 360 IPR029058 -
Spst9g00310 384 Gene3D alpha/beta hydrolase 61 361 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00310 Spst-Chr9 2967829 2972677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00310 68 207 Acyl Lipid Metabolism Gene Families AT1G64670 31.333 1.82e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00310 - - gmx:100791981 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00310 9 2967829 2972677 Spst9g00310 9 2967829 2972677 ECH
Spst8g01979 8 26818739 26822778 Spst9g00310 9 2967829 2972677 PCT