Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00305 ATGGATGATGCTGGGCATCGTGAAAATGGAAGGCACAAAGCAGATCAATATAAATCTGCTCAGGGACAGTGGTTGATGCAACATCAGCCTTCCATGAAGCAGATCATGGCAATTATGGCCGAAAGAGATGCAGCCATTCAAGAAAGAAATCTGGCCATTTCTGAGAAGAAGGCAGCATATGCTGAGCGTGATATGGCATTCTTGCAGCGAGATGCTGCAATTGCGGAACGAAATAATGCAATTTTGGAACGAGACAATGCGATTGCAACTCTTCAGTATCGGGAAAGCTCCTTAAGTAGTGGCAGTATGCCATCATGCCCTCCGGGATGCCAAATTTCACGTGGTGTCAAGCATATACATCATCCCCAGCAACAGGTACATCATATACCTAACATGGGTGATCCTTCTTACAACACACGGGAAATGCATACAACCGATGCCCTCCCTGCAGCCCCCATCACTTCTGAGGCTGGGAAATCAAGACGGGCCAAGCGGCCTAAGGAACCAAAGTCAACTTCACCTAATAAGAAGACTACCAAAGCAGCAAAAAAGGTAAAAAAGGAGAGCGAAGACCTGAATAAGGTTATGTTTGGCAAGGCACATGAGTGGAAGAGTGGTCAGGAAATGGTCAACGGAAGTGATGATCTTAACAAGCAGATAGCAGTGTCTAAGGCTGATTGGAAAGGTCAGGACTTGGGATTGAACCAAGTGGCTTATGATGAGTCAACCATGCCAGCGCCAGTATGTTCTTGTACTGGTGTCCTGAAGCAGTGTTACAAATGGGGTAATGGAGGTTGGCAGTCTGCCTGTTGCACAACCACTCTGTCAATGTATCCACTTCCTGCAGTGCCGAACAAGAGGCATGCACGGGTTGGAGGTAGGAAGATGAGTGGTAGCGCTTTCAACAAGCTGCTTAGTCGCCTTGCTGCGGAAGGTCATGATCTGTCAAACCCTGTTGACCTGAAGGACCATTGGGCCAAACACGGTACCAACCGATACATCACAATAAAGTAG 1014 0.4744 MDDAGHRENGRHKADQYKSAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLAISEKKAAYAERDMAFLQRDAAIAERNNAILERDNAIATLQYRESSLSSGSMPSCPPGCQISRGVKHIHHPQQQVHHIPNMGDPSYNTREMHTTDALPAAPITSEAGKSRRAKRPKEPKSTSPNKKTTKAAKKVKKESEDLNKVMFGKAHEWKSGQEMVNGSDDLNKQIAVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGVLKQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00305 337 MobiDBLite consensus disorder prediction 1 21 - -
Spst9g00305 337 PANTHER - 1 337 IPR010409 -
Spst9g00305 337 Coils Coil 58 85 - -
Spst9g00305 337 SMART GAGA_bind_2 1 337 IPR010409 -
Spst9g00305 337 MobiDBLite consensus disorder prediction 1 15 - -
Spst9g00305 337 MobiDBLite consensus disorder prediction 158 174 - -
Spst9g00305 337 MobiDBLite consensus disorder prediction 146 189 - -
Spst9g00305 337 Pfam GAGA binding protein-like family 1 337 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00305 Spst-Chr9 2881877 2883018 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00305 65 337 BBR or BPC Transcription factor family AT5G42520 65.862 1.88e-122 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Spst9g00305 GAGA_bind 9.5e-111 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00305 - - gmx:100783502 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00305 9 2881877 2883018 Spst9g00305 9 2881877 2883018 ECH