Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00303 ATGGGCAAATCTACCGCCTGCTTCAAGCTAATCACTTGCGGTGGCGATGCGGCCGAGAAGGACGAGTACCACCAAGTCTCCGAGATTAAGGAAGAATCTAATGACAAACGTGGTTGGAGTTTCCGTAAGAAATCTGCAAGGCATCGTGTGCTTAGCAATACTGTGATAGCAGATGCCCCATCTTCGGCAAATAAGGAAAGTTCAGAATGTACTAATTTTAATTTTCAACCACTTCCTGAACCTAATGTTGTTGACAAAATTTACACAACAAATTGTTCTGATGAGAAGCCCCAGTTATCCTCCTTTGAAAGCTCACAAGTAGCAGAAACAAATGTCATTGAAACTGAGAGGAAGGTGGATGTGAATCCACCAGAGTCTGATGTCATCATCATCCAGGCAGCTATTAGAGGGTTACTGGCTCGGAGGGAACTACTACTAAAGCGTAAGAAAGTAGTGAAGTTGCAAGCTGCTATTCGTGGGTACTTGGTCCGGCTGCATGCTGTGGGAACCCTGCGTTGTGTTCAAGCCATCATCAAGATGCAGGTCCTTGTGCGAGCTCGTCGTACTCAACAATCACATTTGCAAAATCATTTAAATCACAAGGATGGCAAAAGCGATTCCCCAGAAGATTTGGGAAATGAAAATCTCATGACCAAATCAAATGTGAATTACACTTCAATTCAGAAGCTGCTAAGCAATAGGTTTGCTAGTCAGCTGTTAGAATCAGCACCAAAGAAAAAACCTATCCATGTCAAGTGTGATCCTTCTAAAGCCGACTCTGCTTGGAAATGGTTGGAAAGGTGGATGTCCGTATCATCAAAAGATATTGCAGAGTGCAATGAAACTAGTTCTGTGGCAGAGCAATCAAGGGAAACCAAAGACAGCGCTTCTGTGTTTCAATTTCAAACGGGTGTTCCATCTGAACCCTCTCCCCCAGCCGTTGACTCAGTACCCACTGTTGAAGATTCGCCTCTGCCATCTGAAGATGAAGACAAGTTGATTATTTATGATGCTAATAACTTTGAGTTTCAAGCAAGCAGCTCCACGCCTTCTATTATAAAAGATGACATGCAACAGGTTCCTGCTGAAGAAAAACCTGCATCATATAATGCTAAAGTTGCCTTGGCTGATACTGATTCCTTCCAAAATAACAATTCAGTATCAGATGCAAGTGCCGCATCAGGGCTTTACTCTCTTCACAAGGGACCTGAAATTGCCCCACCATCAGAGCATAATTCTCTCCGTGAGGAGCCTGAAATTGGCCCACCACCAGAGCTTAATTCTTTTTATGAGAAACCTGAAATTGATAACGAGAAGAGCAAACGATCCATGAAAAGATTTGCCTCAGACCAACTAGAGTCTGAAGGAAAGAAACCTGTGAATGGATCAAGAAAGGTCAGCAATCCTGCATTTATTGCTGCCCAGACAAAATTTGAAGAGCTGAGTTCAATTGCAAATTCAGGTAGGGCAAGCAGTTTGTCCTACCAAGATTCAGCAGTTGAATCACAAGGAGATACCTCTTCTGTTGGCAATGACACTGCATATAAACCAAAAGAGTTTGCATTTGAAAATCCTGCTCTTTATAATGCTAGGCTTGCTGGTTCTGAATGTGGCACTGAACTCTCCATTTCTTCCACTCTTGATTCACCTGATGTATCAGAGCCTGGCGTTATGGAAAATGAGCGAGATGCCAAAGATTTGGTGGAAGGGATTGGTAATCTTGAGAATGCAATAAACCGAGATGATGAGGTCAATGTTTCATCTGCCATCCCAGCTTCTAACCTAGCTACTTCTGCTCTGCATCAGTCGGAGGTTGTTGATGACATTAGTGGCAATTTGGGTCACTCAGTTGTAGCTGTGGACTTTGAAGAGCCTGCTATTAATAAGACTGAGAAAAATGCATCAGATCTGCAGAGAGAGCCAGCAGAGGCTGTTCTGCAAGATTTAAGATCATCTCCAGAAGCATCACCTAGAAGCCATTTAACTGTCCCTGAATCTCAAGGGACCCCTTCAAGTCAAGTGTCTGTGCAGCCTAAAGAGAGCAAAATTAACAAGAGTAGATCTGGTGGTAAACGTCGGAGCCTATTATTAAGTAACAAAGCACCTACAACTCCAAATCAAGATTCAGGCTCAAGAGAAAGTAGGGAGGAGCAACTACCTAAAGATCAGCAGAATGGAAAGAGGCGCAGTTCCTTTGGCTCAGTAAAGCCTGATCAAATTGATCAAGAACCCAGAGATAATAGTACTAGCAATAATTCTATTCCCCATTTCATGCAAGCTACAGAATCTGCTAGGGCCAAGATTAATGCAAATAACTCTCCAAGATCAAGCCCAGATGTGCATGAACGAGACATTGAAGCTAAGAAGAGACATTCCTTATCTGGTGCTACAGGTAGGCAAGGTTCTCCACGGATCCAACGATCAACATCTAAGGCACAGCAGAGTGCCAAAGGAAATAATGTACATCCTCCTCAAGAGAGAAAATGGCTGAGGTGA 2496 0.4323 MGKSTACFKLITCGGDAAEKDEYHQVSEIKEESNDKRGWSFRKKSARHRVLSNTVIADAPSSANKESSECTNFNFQPLPEPNVVDKIYTTNCSDEKPQLSSFESSQVAETNVIETERKVDVNPPESDVIIIQAAIRGLLARRELLLKRKKVVKLQAAIRGYLVRLHAVGTLRCVQAIIKMQVLVRARRTQQSHLQNHLNHKDGKSDSPEDLGNENLMTKSNVNYTSIQKLLSNRFASQLLESAPKKKPIHVKCDPSKADSAWKWLERWMSVSSKDIAECNETSSVAEQSRETKDSASVFQFQTGVPSEPSPPAVDSVPTVEDSPLPSEDEDKLIIYDANNFEFQASSSTPSIIKDDMQQVPAEEKPASYNAKVALADTDSFQNNNSVSDASAASGLYSLHKGPEIAPPSEHNSLREEPEIGPPPELNSFYEKPEIDNEKSKRSMKRFASDQLESEGKKPVNGSRKVSNPAFIAAQTKFEELSSIANSGRASSLSYQDSAVESQGDTSSVGNDTAYKPKEFAFENPALYNARLAGSECGTELSISSTLDSPDVSEPGVMENERDAKDLVEGIGNLENAINRDDEVNVSSAIPASNLATSALHQSEVVDDISGNLGHSVVAVDFEEPAINKTEKNASDLQREPAEAVLQDLRSSPEASPRSHLTVPESQGTPSSQVSVQPKESKINKSRSGGKRRSLLLSNKAPTTPNQDSGSRESREEQLPKDQQNGKRRSSFGSVKPDQIDQEPRDNSTSNNSIPHFMQATESARAKINANNSPRSSPDVHERDIEAKKRHSLSGATGRQGSPRIQRSTSKAQQSAKGNNVHPPQERKWLR 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00303 831 MobiDBLite consensus disorder prediction 777 793 - -
Spst9g00303 831 MobiDBLite consensus disorder prediction 652 683 - -
Spst9g00303 831 ProSiteProfiles IQ motif profile. 147 176 IPR000048 GO:0005515
Spst9g00303 831 ProSiteProfiles IQ motif profile. 125 153 IPR000048 GO:0005515
Spst9g00303 831 PANTHER IQ-DOMAIN 5-RELATED 1 801 - -
Spst9g00303 831 MobiDBLite consensus disorder prediction 644 754 - -
Spst9g00303 831 MobiDBLite consensus disorder prediction 193 216 - -
Spst9g00303 831 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 195 IPR027417 -
Spst9g00303 831 MobiDBLite consensus disorder prediction 710 724 - -
Spst9g00303 831 Pfam IQ calmodulin-binding motif 128 144 IPR000048 GO:0005515
Spst9g00303 831 Pfam IQ calmodulin-binding motif 148 166 IPR000048 GO:0005515
Spst9g00303 831 Gene3D - 126 166 - -
Spst9g00303 831 SMART iq_5 123 145 IPR000048 GO:0005515
Spst9g00303 831 SMART iq_5 146 168 IPR000048 GO:0005515
Spst9g00303 831 MobiDBLite consensus disorder prediction 795 821 - -
Spst9g00303 831 MobiDBLite consensus disorder prediction 399 468 - -
Spst9g00303 831 MobiDBLite consensus disorder prediction 485 513 - -
Spst9g00303 831 MobiDBLite consensus disorder prediction 769 831 - -
Spst9g00303 831 MobiDBLite consensus disorder prediction 195 209 - -
Spst9g00303 831 MobiDBLite consensus disorder prediction 431 460 - -
Spst9g00303 831 MobiDBLite consensus disorder prediction 691 709 - -
Spst9g00303 831 MobiDBLite consensus disorder prediction 303 327 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00303 114 831 IQD Protein Family AT1G19870 36.327 1.76e-105 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00303 - - var:108343123 1370.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00303 9 2852851 2858551 Spst9g00303 9 2852851 2858551 ECH