Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00302 ATGCGCCGATTGCAAAAACCCAAAAGAGTTTCATGGGCCTCCGATTTAGATCTTTGTCAGCCAATGCCAAAAGAAGCACTTGACAACCGATTACAATCTGATCGGACTTTGAGAATAAATGCAAGACCTCAGCCACTTCCAACATGGGAGGGCCAAGTCATAGTGATATTTTCTCAAGATGTACTGCTGGTGCATGCAGATTTATCAGAGGAAAAGTCCAAATCTGAGATGAAGAGGTGGAAGGGTCTATTTGGTGTTCCCCAAGTTTCTGTCTGTGCACACTGGACATGGAAAGAAGGCCAGACTCACCAGTGGGGAAGATCTTTTTCTCTAAGTCTAGTTTTAATGAGAGGCATCAGTATTTCACGTAGGAGCGTGGTTAGGCTATTCTTATCAGAAGAATCCCCTTCACAGGTCGGGTTAAATTCTCAAGATCACCTCCAAGCAAAGGCATCATTGCATTTGCCTCCTGGCGGGCCAGGTTCTGATGACATTCTGCCTCCTGGATTTGAGGGAACTCATTCTTCAAGTCATTTTGAGATTAGGCCATCTCAAATACCAGTTATTAAGTGGATTACTCCTCCAAAGATTGCGCTAAATCACACATGGCAAGTGGTGTCTGGGGAAGAAAGCATAGAGGTAGAGGATCAACGTCAGAGAGAGATGAGAGTACTTGAAGCTATTTATCCTCGCATATCTTCCATTCCTCCAAACCCTTCAGTTTCAATGGATATTGAAGATTCCAATTACATGGATGGGCAAACTCCTTTGATACCAATAACGCCAATTGAAGATGAAGATGCAGCACCAGAAGCTTTATCAGATTCCTTGGAACCATTTGATGATTCACAATCCCTTGAATTACCTCCTGGTATATTGAAGAATCCAAACCCTGCTACAAGTACGCAATTTGCTCGTGGTCTTCCATCTGATGTAGCTGCTGCATCTGTTGCTATAACTAACATTGTGAAGAACAATGAACGTGGAAAATTGATTGACCATGGCTTACTTAATAATATTCTCAAGAATCCAGAAGTGATTGAGAAATTGGTTAGAGATTATGGAGCTACTAATAATTCACAATATGTACATAATGTGGGGTCGTCCTCTGCGGCTTTTTCAAATCCTCCTATGCCTATTAGTCAAGGAGAAACCGCTACACCTTCACCGATTGCTTTTCCGGCCGTCACTTCCTATACACCATCTACTGGAGGTCAGGTGGCACCTGTTTCTACCCAATGGCCTCCTAGGCCTTCAGCCAGTTCAACTATTGTTTCTTCTCCTGTTGAGGTCCCTGCTGCTAAAGATGTTAACTACTATAAGAGTTTAATTCAGCAACATGGAGGAGACAAACAAGAAACAGTTCCATACTCCAGTAAACGTCAGATTCATCAGCCAGTAACAAACTATGAGCCACCATTCAATCAAAGAGGTAAAGTGTCAAAACCAAAGATAATGAAGCCTTGTATCTTTTTCAACAGTTCTAGAGGATGTCGAAATGGAGCTAACTGTGCCTACCAGCATGACGCATCGTTTCAGCCTCGGGGTAATAGCGTGCCAGGGATACAAAGTTCAAAGAGGATGAAAATGGATCATGAGATTAGCAGTTAA 1611 0.4271 MRRLQKPKRVSWASDLDLCQPMPKEALDNRLQSDRTLRINARPQPLPTWEGQVIVIFSQDVLLVHADLSEEKSKSEMKRWKGLFGVPQVSVCAHWTWKEGQTHQWGRSFSLSLVLMRGISISRRSVVRLFLSEESPSQVGLNSQDHLQAKASLHLPPGGPGSDDILPPGFEGTHSSSHFEIRPSQIPVIKWITPPKIALNHTWQVVSGEESIEVEDQRQREMRVLEAIYPRISSIPPNPSVSMDIEDSNYMDGQTPLIPITPIEDEDAAPEALSDSLEPFDDSQSLELPPGILKNPNPATSTQFARGLPSDVAAASVAITNIVKNNERGKLIDHGLLNNILKNPEVIEKLVRDYGATNNSQYVHNVGSSSAAFSNPPMPISQGETATPSPIAFPAVTSYTPSTGGQVAPVSTQWPPRPSASSTIVSSPVEVPAAKDVNYYKSLIQQHGGDKQETVPYSSKRQIHQPVTNYEPPFNQRGKVSKPKIMKPCIFFNSSRGCRNGANCAYQHDASFQPRGNSVPGIQSSKRMKMDHEISS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00302 536 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 374 531 - -
Spst9g00302 536 MobiDBLite consensus disorder prediction 157 177 - -
Spst9g00302 536 ProSiteProfiles Zinc finger C3H1-type profile. 483 511 IPR000571 GO:0046872
Spst9g00302 536 MobiDBLite consensus disorder prediction 515 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00302 Spst-Chr9 2844791 2849859 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Spst9g00302 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00302 - - gmx:100783321 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00302 9 2844791 2849859 Spst9g00302 9 2844791 2849859 ECH