Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00299 ATGTCGATCTCGATGTCAGCAGGAGGACTCTCAAAATGCACCAGAATCCGCCACATCGTCAGGCTCCGCCAAATGCTGCGGCGCTGGCGAACCAAGGCCCGCATGTCGGCCCACCGAGTACCCTCCGATGTGCCGGCGGGACACGTGGCGGTGTGCGTGGGCAGTAACTCCAGGAGATTTGTGGTGCTCGCCACTTACCTGAACCACCCTGTCTTCAAGAAGCTACTAGTTGAGGCGGAGGAAGAGTACGGGTTCTCCAACCACGGTCCTCTCGCCATTCCCTGCGACGAAGCACTCTTCGAACAACTCCTCCGCTTCATTTCACGCTCCGACCCTCCTCACTCCACCCGCTTCGACGACTGCCACCTCCCTCTCCGAAACAACCTCGATTTCTGCCTCGAATCTCGACCTCTACTCCACTGA 423 0.5887 MSISMSAGGLSKCTRIRHIVRLRQMLRRWRTKARMSAHRVPSDVPAGHVAVCVGSNSRRFVVLATYLNHPVFKKLLVEAEEEYGFSNHGPLAIPCDEALFEQLLRFISRSDPPHSTRFDDCHLPLRNNLDFCLESRPLLH 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00299 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 32 103 IPR003676 GO:0009733
Spst9g00299 140 Pfam Auxin responsive protein 21 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00299 Spst-Chr9 2832167 2832589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00299 10 139 Calmodulin-binding Proteins AT4G34750 50.694 1.42e-40 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00299 K14488 - gmx:100794795 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00299 9 2832167 2832589 Spst9g00299 9 2832167 2832589 ECH
Spst8g01991 8 27137786 27144618 Spst9g00299 9 2832167 2832589 PCT