Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00295 ATGGAAACTCAACACCAACAACCCTCCACCAAGTCTAGGTTCAGACGCATCTGTGTTTACTGCGGTAGCAGCCCTGGCAAAAGCCCCAGCTACCAGCTCGCTGCTGTTCAACTAGGAAAACAACTGGTGGAGAGGAAGATTGACTTGGTTTATGGAGGAGGAAGCATAGGATTGATGGGGCTAATCTCACAAGTTGTATACGATGGTGGACGCCACGTGTTAGGGGTCATTCCAAAGACACTTAATGCAAGAGAGATCACCGGAGAGAGTGTCGGAGAAGTGAGAGCCGTATCGGGCATGCACCAACGCAAGGCAGAGATGGCCCGACAAGCCGATGCATTCATTGCACTGCCAGGTGGATATGGCACCCTTGAAGAACTGTTGGAAATTATCACCTGGGCTCAGCTAGGTATCCATGATAAACCGGTGGGGTTGCTGAACGTGGATGGGTACTACAACTCGCTGCTGGCATTCATGGACAAAGCTGTGGACGAAGGTTTCGTAACACCTGCTGCCCGTCACATTATTGTTTCTGCCCAAACTGCCCAAGACCTCATGTGCAAACTTGAGGAATATGTCCCCGAGCACTCTGGCGTGGCCCCCAAGCTAAGTTGGGAGATGGAGCAACAGTTAGTTAACACTGCAAAGTCAGACATATCCCGTTGA 666 0.509 METQHQQPSTKSRFRRICVYCGSSPGKSPSYQLAAVQLGKQLVERKIDLVYGGGSIGLMGLISQVVYDGGRHVLGVIPKTLNAREITGESVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYNSLLAFMDKAVDEGFVTPAARHIIVSAQTAQDLMCKLEEYVPEHSGVAPKLSWEMEQQLVNTAKSDISR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00295 221 Pfam Possible lysine decarboxylase 59 188 IPR031100 -
Spst9g00295 221 SUPERFAMILY MCP/YpsA-like 13 192 - -
Spst9g00295 221 Gene3D - 3 191 - -
Spst9g00295 221 PANTHER LOG FAMILY PROTEIN YJL055W 8 211 - -
Spst9g00295 221 FunFam CASP-like protein 4 191 - -
Spst9g00295 221 NCBIfam Rossman fold protein, TIGR00730 family 16 192 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00295 Spst-Chr9 2770077 2772207 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00295 K22522 - gmx:100782787 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00295 9 2770077 2772207 Spst9g00295 9 2770077 2772207 ECH
Spst8g01999 8 27423080 27429308 Spst9g00295 9 2770077 2772207 PCT