Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00260 ATGGCTTCATCGCCATGTGATTGTTGGACCCATCTTTCTCACTCACTGTCTCCTCCATCCTCTTCTTCTTCTTCTTCTTCTTCTTCATCCTCCTCACTCCCCCAAACCCTTCCTCCTCCTCCTTCTTCTTCCTCCATTGAACATGTCTGGAACGACATCAAACTCTCCTCCCTCTCCAACTCGCCCGTTCAATTCAACCACTCTTCTTCCCATTCTTCTCTCCTCACCCTCTCTTCCTCTCCCACCCCTCTCTTTCACAAACACAGCCACCACTCTCTTCTCCCTCTCTCTAACACTTCTTTCCCCTCCGACCAAACCACACACCACCAAGATCAACGACATGCGCGCATCATGAAGAATCGAGAATCAGCGGTTCGGTCCAGAGCCAGAAAACAGGCACGCTTGGAAGTTGAAATTGCTCGTTTGAGGGAAGAAAATTCTAAACTAAGAAAACAATTGAAAGAGGCATGGCAACCCACCGGTTTGTACCGTGACGAGTCTCTATCTCTCGACTACCGCGACAAGAATTCTATGCGAGGTTGTTGCTTTGGCGGGAACATCGTTTCAACGTTGTTTATACGGAGTCGTTCTCACAAATTGTCTTGCATTGTGTCTTGTCAATTTATGGTTGAAATTACAATTGGATTTCATCCAATCGTACCAAAGTAA 669 0.4679 MASSPCDCWTHLSHSLSPPSSSSSSSSSSSSSLPQTLPPPPSSSSIEHVWNDIKLSSLSNSPVQFNHSSSHSSLLTLSSSPTPLFHKHSHHSLLPLSNTSFPSDQTTHHQDQRHARIMKNRESAVRSRARKQARLEVEIARLREENSKLRKQLKEAWQPTGLYRDESLSLDYRDKNSMRGCCFGGNIVSTLFIRSRSHKLSCIVSCQFMVEITIGFHPIVPK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00260 222 CDD bZIP_plant_BZIP46 112 155 - -
Spst9g00260 222 MobiDBLite consensus disorder prediction 1 33 - -
Spst9g00260 222 SMART brlzneu 108 169 IPR004827 GO:0003700|GO:0006355
Spst9g00260 222 MobiDBLite consensus disorder prediction 1 45 - -
Spst9g00260 222 SUPERFAMILY Leucine zipper domain 113 158 IPR046347 GO:0003700|GO:0006355
Spst9g00260 222 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 116 130 IPR004827 GO:0003700|GO:0006355
Spst9g00260 222 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 70 155 IPR043452 GO:0003700|GO:0045893
Spst9g00260 222 Pfam bZIP transcription factor 110 155 IPR004827 GO:0003700|GO:0006355
Spst9g00260 222 Gene3D - 111 158 - -
Spst9g00260 222 Coils Coil 125 152 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00260 111 152 bZIP Transcription Factor Family AT3G56850 60.000 4.72e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst9g00260 bZIP_1 9.2e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00260 K14432 - pvu:PHAVU_009G018700g 175.637