Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00208 ATGAGTCATCCTCCCCCAGAGAGATTTAGTAAGGAAACCGTGGAAGATATAAACCAAGAGGCTGTGCCGCGGAAACTTATAAAGTACACATTGGATGAGTTGAAAAGTGCGACCAAAAACTTCAGACCAGACACGGTCTTAGGTGAAGGTGGTTTTGGACGTGTTTTCAAAGGGTGGATTGATAAGAACACGTTCAAGCCTTCAAGAGTCGGCGTTGGAATTCCCGTTGCGGTGAAGAAATCCAACCCCGATAGCCTTCAGGGTCTGCAAGAATGGAAGAGTGAAGTGCAACTTTTGGGGGAGCTCTCTCATCCAAACCTAGTTAAACTAATTGGCTACTGCTGGGAGGAAAATCAATTCCTGCTGGTATATGAATACATGCAAAAGGGAAGCCTTGAAAGCCACCTATTCAGAAAAGGTCCAGAGCCACTTTCATGGGATATAAGGCTGAAGATAGCCATAGGAGCTGCCAGAGGCCTAGATTTCTTGCATACATCAAACAAGTCTGTCATCTACAGAGACTTCAAGTCCTCCAACATTTTGCTTGACGGGGATTTCAATGCGAAGTTATCAGATTTTGGGTTGGCAAAGCTTGGCCCGGTCAATGGTAAATCCCATGTAACCACGCGGATCATGGGCACCTATGGTTATGCAGCACCTGAATACATGGCCACAGGGCACCTGTATCTCAAAAGCGATGTGTACGGATTCGGCGTCGTTCTGCTAGAAATGCTAACGGGAAGAGCAGCTCTGGACACAACCCGGCCCACGGATCAGCAGAATTTGGTGCTTTCCACTATCTCATCTCTGCATGACAAAAAGAGGCTCAAAAAGATAATGGACCCAAAGATGGACGACCAATATTCTCTAAGGGCTGCATTTAGCATAGCCCAAGTTATCCTCAAATGTTTACAAAATGACCACAAAAAACGACCCTCCATGGAGGAGGTTCTGGGAACCTTAGAAAAAGCCCAAAACATCAAGTACAAACCCAAAGGGAAGAAACCCAGTGCCATTGGCCAAACATCAGAGGAGCATCTGCATCACCCAAATAACCCACCACCGCTTCACTACTACTACAACAACAACAACAACAACAACAACAACAACAACAACGGTTACCCCAAATCACGACCATCTCATTCTCCTTCTTCACATTAG 1161 0.4582 MSHPPPERFSKETVEDINQEAVPRKLIKYTLDELKSATKNFRPDTVLGEGGFGRVFKGWIDKNTFKPSRVGVGIPVAVKKSNPDSLQGLQEWKSEVQLLGELSHPNLVKLIGYCWEENQFLLVYEYMQKGSLESHLFRKGPEPLSWDIRLKIAIGAARGLDFLHTSNKSVIYRDFKSSNILLDGDFNAKLSDFGLAKLGPVNGKSHVTTRIMGTYGYAAPEYMATGHLYLKSDVYGFGVVLLEMLTGRAALDTTRPTDQQNLVLSTISSLHDKKRLKKIMDPKMDDQYSLRAAFSIAQVILKCLQNDHKKRPSMEEVLGTLEKAQNIKYKPKGKKPSAIGQTSEEHLHHPNNPPPLHYYYNNNNNNNNNNNNGYPKSRPSHSPSSH 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00208 386 Gene3D Phosphorylase Kinase; domain 1 26 126 - -
Spst9g00208 386 Gene3D Transferase(Phosphotransferase) domain 1 127 341 - -
Spst9g00208 386 Pfam Protein tyrosine and serine/threonine kinase 45 319 IPR001245 GO:0004672|GO:0006468
Spst9g00208 386 CDD STKc_IRAK 47 323 - -
Spst9g00208 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Spst9g00208 386 SUPERFAMILY Protein kinase-like (PK-like) 26 328 IPR011009 -
Spst9g00208 386 ProSiteProfiles Protein kinase domain profile. 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00208 386 MobiDBLite consensus disorder prediction 356 386 - -
Spst9g00208 386 MobiDBLite consensus disorder prediction 329 386 - -
Spst9g00208 386 FunFam Serine/threonine-protein kinase PBS1 127 338 - -
Spst9g00208 386 PANTHER OS01G0588500 PROTEIN-RELATED 21 325 - -
Spst9g00208 386 ProSitePatterns Protein kinases ATP-binding region signature. 47 80 IPR017441 GO:0005524
Spst9g00208 386 FunFam Serine/threonine-protein kinase BIK1 8 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00208 Spst-Chr9 1818308 1821469 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00208 29 321 Glycoside Hydrolase AT3G07070 51.689 2.37e-100 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst9g00208 PK_Tyr_Ser-Thr 3.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00208 - - gmx:100812725 573.933