Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00207 ATGAGTTGCTTTTCGTGCTTTGTTTCTCGTCGGAAAGATGTGAGAAGGGTTGAAATTGACAATGGGACTCGATCTGCTACTGCTTCTTCCTCAGAGGGTGAAAGGAAGAGAGAATCCTCAGAGGGAAAGGGGAAGAGTGTGAGTAGTAGTAAAGGAAGTACCGCGGCTGCTAGTTTTGGTTTTCGCGAACTCGCTGCGGCGACGAGGGGTTTCAAGGAATTGAACTTAATTGGAGAAGGTGGTTTTGGAAGGGTCTACAAGGGTCGACTTTCAACAGGCGAGCTTGTTGCCGTGAAACAATTGAGTCATGATGGTCGGCAAGGTTTTCAGGAATTCGTGACGGAGGTTCTTATGTTGAGCATGCTGCACCATTCTAATCTTGTGAAGTTAATTGGCTACTGCACTGATGGAGATCAAAGGCTTTTGGTTTATGAGTACATGCCGATGGGTTCACTGGAAGATCATCTTTTTGATCCTGCCCAAGACAAAGAACCCCTAAGTTGGAGTTCTCGAATGAAGATTGCTGTTGGAGCTGCTCGTGGCCTCGAGTATCTCCATTGTAAAGCAGATCCACCTGTTATCTACAGAGACTTGAAATCTGCAAACATCTTGTTAGATAATGAATTCAACCCAAAACTGTCAGATTTTGGGCTTGCTAAACTTGGACCTGTTGGAGACAATACCCATGTTTCTACCAGAGTGATGGGAACATATGGCTACTGTGCGCCTGAGTATGCCATGAGTGGAAAATTAACTCTTAAATCTGATATATACAGCTTTGGTGTGGTTTTGTTGGAGTTGATCACTGGACGTAGAGCTATAGATGTCAGTAGAAAACCGGGAGAGCAAAACTTGGTTTCATGGTCTCGTCCGTATTTCAGTGACCGGAGAAAGTTTGTACATATGGTTGACCCTCTTTTACAAGGCAACTTCCCCTTGCGCTGTTTGCATCAAGCAATTGCTATAACTGCCATGTGTCTCCAGGAGCAACCAAAATTCCGTCCACTTATTGGTGATATTGTTGTTGCACTGGAATACCTAGCTTCTCAGAGTATTGCTGAAGTGCACAGACAAGGTGGTCGCAGCTCGCCGCAACAACCGCCTTCTGAAATGGACAGAAATTAA 1125 0.4498 MSCFSCFVSRRKDVRRVEIDNGTRSATASSSEGERKRESSEGKGKSVSSSKGSTAAASFGFRELAAATRGFKELNLIGEGGFGRVYKGRLSTGELVAVKQLSHDGRQGFQEFVTEVLMLSMLHHSNLVKLIGYCTDGDQRLLVYEYMPMGSLEDHLFDPAQDKEPLSWSSRMKIAVGAARGLEYLHCKADPPVIYRDLKSANILLDNEFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDVSRKPGEQNLVSWSRPYFSDRRKFVHMVDPLLQGNFPLRCLHQAIAITAMCLQEQPKFRPLIGDIVVALEYLASQSIAEVHRQGGRSSPQQPPSEMDRN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00207 374 PANTHER OS07G0668900 PROTEIN 3 353 - -
Spst9g00207 374 MobiDBLite consensus disorder prediction 30 44 - -
Spst9g00207 374 Pfam Protein kinase domain 71 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00207 374 MobiDBLite consensus disorder prediction 18 52 - -
Spst9g00207 374 FunFam probable serine/threonine-protein kinase RLCKVII 43 146 - -
Spst9g00207 374 ProSiteProfiles Protein kinase domain profile. 71 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00207 374 FunFam Serine/threonine-protein kinase PBS1 147 361 - -
Spst9g00207 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Spst9g00207 374 Gene3D Transferase(Phosphotransferase) domain 1 147 362 - -
Spst9g00207 374 SUPERFAMILY Protein kinase-like (PK-like) 49 345 IPR011009 -
Spst9g00207 374 ProSitePatterns Protein kinases ATP-binding region signature. 77 99 IPR017441 GO:0005524
Spst9g00207 374 SMART serkin_6 71 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00207 374 CDD STKc_IRAK 77 345 - -
Spst9g00207 374 Gene3D Phosphorylase Kinase; domain 1 29 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00207 Spst-Chr9 1808477 1812015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00207 1 370 Glycoside Hydrolase AT3G07070 57.592 6.18e-151 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Spst9g00207 Pkinase 5.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00207 - - gmx:100796595 597.045