Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00195 ATGTATGATTTGGGAGCGGCTATGCCGGTGGGAATGGATTTACCTCCTCCGATTACTGTGGCAGAGGACAAAAACAGTGCATTTGTAATGGAAGATGAGGGATCAGGAGATTTGAATAATCTAAAATCAATGACCAAGGGTAAGCCTCCGCGACATGTTTCGAGTTTGAGGCCAAGCGTTAGCACCACCGGATTGATGGCTGTAGCAGATTTGAGTTTGGATGTGGGGGTTACTGGGAGCAAGTCACCTTCTGAAGAAAAAACGGAGTTTTTACCAATATTTCGGTCAGGAAGTTGTGCTGAAAGAGGGCCTAAACAATATATGGAAGACGAACACCTATGTATAGATGATCTTATTCAGCATATAGGCCCTGCCTCAACTATTCCTTTACCTGGAGCTTTTTATGGGGTGTTTGATGGCCATGGAGGTACAGACGCAGCTTTGTTCATAAGAAATAACATCCTAAAATTCATAGTTGAGGACTCCCATTTTCCAACATGCGTGGGGCAGGCAATGACGAGTGCGTTTCTGAAAGCCGACTATGCATTTGCAGATTCTAGTTCGCTTGATATCTCCTCTGGGACCACTGCTTTAACTGCTCTTGTATCTGGAAGGACCATGATAGTAGCGAATGCCGGGGATTGTAGAGCTGTACTGGGGAGGCGAGGTAGAGCAATTGAGATGTCGAAAGACCAGAAACCAGATTGCATTTCGGAAAGGCTAAGGATTGAGAAACTTGGTGGAGTGGTATATGATGGATACTTGAATGGGCAGTTATCTGTTTCCCGAGCCTTGGGAGACTGGCACATGAAGGGTCCCAAGGGTTCTGCCTGTCCCTTGAGTTCTGAGCCAGAGCTGCAGGAAATCAATCTGACCGAGGATGACGAGTTCTTGATCATGGGCTGTGACGGCCTATGGGATGTAATGAGTAACCAATGTGCAGTGACCATGGCAAGGAAAGAACTAATGATACATAATGATCCTCAAAGGTGTTCAAGAGAGCTGGTTAGAGAGGCTCTTAAGCGTAACTCGTGTGATAATTTGACTGTTATCGTGATATGTTTTTCCCCAGATCCTCCTTCTAGGATAGAGGCACCTCCTTCTCGAGTCAGGAGGAGTATATCGGCGGAAGGCCTCAATTTACTTAAGGGTGTGTTAGACGGTTAG 1167 0.4602 MYDLGAAMPVGMDLPPPITVAEDKNSAFVMEDEGSGDLNNLKSMTKGKPPRHVSSLRPSVSTTGLMAVADLSLDVGVTGSKSPSEEKTEFLPIFRSGSCAERGPKQYMEDEHLCIDDLIQHIGPASTIPLPGAFYGVFDGHGGTDAALFIRNNILKFIVEDSHFPTCVGQAMTSAFLKADYAFADSSSLDISSGTTALTALVSGRTMIVANAGDCRAVLGRRGRAIEMSKDQKPDCISERLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGPKGSACPLSSEPELQEINLTEDDEFLIMGCDGLWDVMSNQCAVTMARKELMIHNDPQRCSRELVREALKRNSCDNLTVIVICFSPDPPSRIEAPPSRVRRSISAEGLNLLKGVLDG 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00195 388 MobiDBLite consensus disorder prediction 34 57 - -
Spst9g00195 388 FunFam Probable protein phosphatase 2C 22 80 358 - -
Spst9g00195 388 SMART PP2C_4 85 353 IPR001932 -
Spst9g00195 388 PANTHER PROTEIN PHOSPHATASE 2C 85 353 IPR015655 GO:0004722|GO:0006470
Spst9g00195 388 CDD PP2Cc 94 355 IPR001932 -
Spst9g00195 388 ProSiteProfiles PPM-type phosphatase domain profile. 95 355 IPR001932 -
Spst9g00195 388 ProSitePatterns PPM-type phosphatase domain signature. 134 142 IPR000222 GO:0043169
Spst9g00195 388 SUPERFAMILY PP2C-like 89 356 IPR036457 -
Spst9g00195 388 Pfam Protein phosphatase 2C 96 347 IPR001932 -
Spst9g00195 388 Gene3D - 75 358 IPR036457 -
Spst9g00195 388 SMART PP2C_SIG_2 110 355 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00195 Spst-Chr9 1705952 1708358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00195 10 388 PP2C-type Phosphatase Gene Family AT2G33700 70.312 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00195 K14803 - gmx:100778015 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00195 9 1705952 1708358 Spst9g00195 9 1705952 1708358 ECH