Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00169 ATGGCTGCTTACAACAACAGTGAGGGAAATGAAGAAGACCAATTAGCTGCTTTTGTTGCTCCTCGCCCTTTCATCACACCACCCCTCCTCGACGGAGAAGGGGCCTCCTCCGCCGCCCGCCGCCATCGTGGACGTCCTCCAGGATCCAAGAACAAGCCCAAGCCACCAGTCATAGTCACGCGCGACAGCGCGAATGCGTTGCACTCGCACGTGCTGGAGGTCTCCCTCGGTGCCGAGGTGATAGAGAGTCTCTCCGCTTACGCGCGGCGCCGAGGGAGAGGAGTTTGTGTGCTCAGTGGCACTGGCGCAGTGGCCAATGTCGCACTCCGTCAACCGGCTGGAAGTGTGCTCACCTTCCCCGGACGGTTTGAGATAGTTTCCATAACGGGGACGGTGCTTCCGCCGCCGGCGCCGCCCGGTTCTGACGGGTTGTCGGTTTATTTGTCTGGGGCGCAGGGACAGGTGGTTGGGGGCATCGTGGTGGCCCCTCTGGTGGCGTCGAGTCACGTGGTGTTGGTGGCTGCTTCCTTCGCTAACGCCATGTTTGAAAGGTTACCCTTGCCCTTGAATCACCATGATGATGTCGATCACGATCATGATAATAATGAGGATCATGTTCCGGTAGCGACTTCACGTGGCGTCACGGGATCTGGACAGGTGGGAGATGGAAGGAATAATCCCTTGTAG 687 0.5866 MAAYNNSEGNEEDQLAAFVAPRPFITPPLLDGEGASSAARRHRGRPPGSKNKPKPPVIVTRDSANALHSHVLEVSLGAEVIESLSAYARRRGRGVCVLSGTGAVANVALRQPAGSVLTFPGRFEIVSITGTVLPPPAPPGSDGLSVYLSGAQGQVVGGIVVAPLVASSHVVLVAASFANAMFERLPLPLNHHDDVDHDHDNNEDHVPVATSRGVTGSGQVGDGRNNPL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00169 228 Gene3D - 68 198 - -
Spst9g00169 228 SUPERFAMILY AF0104/ALDC/Ptd012-like 64 188 - -
Spst9g00169 228 Pfam Plants and Prokaryotes Conserved (PCC) domain 69 178 IPR005175 -
Spst9g00169 228 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 28 203 IPR014476 GO:0003680
Spst9g00169 228 MobiDBLite consensus disorder prediction 212 228 - -
Spst9g00169 228 MobiDBLite consensus disorder prediction 27 57 - -
Spst9g00169 228 CDD DUF296 70 177 IPR005175 -
Spst9g00169 228 MobiDBLite consensus disorder prediction 193 228 - -
Spst9g00169 228 ProSiteProfiles PPC domain profile profile. 64 198 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00169 Spst-Chr9 1534832 1535518 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00169 35 187 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 68.902 9.46e-63 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00169 - - gmx:100778715 269.24