Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00154 ATGGTACATGCAGATAATGGGTTTTACAAAAATGGGTACGGCTACAACAACAACAACAAGGTTGAGCACGTTATGAATATTCCTCCACCTCCAGGAGCAGCATGGGCTCCACCCAATCGTATTAGCAGTGACGTGAGCTCTTCCGGTTTCTCTGGGCCTCACGGTCCCGTTTTGCCACCTCCACACCCCTCAGTGGCCCTCGGATTCAACCAAAGCTCCTTCACTTACGACGAGCTCTCAGCTGCCACTGGTGGCTTTAGCCAACGCAACCTCCTCGGTCAGGGTGGCTTCGGATACGTCCACAAAGGTGTTCTACCCAATGGCAAGGAAATTGCAGTCAAGAGCCTGAAATCCACAGGGGGCCAAGGTGACAGAGAATTCCAAGCTGAGGTTGATATCATCAGCCGTGTCCACCATCGCCATCTCGTTTCACTTGTTGGCTATTGCATGTCAGAAAGCAAAAAGATCCTCGTTTATGAGTTTGTGCCTAACAAGACCCTTGAATACCACCTTCATGGAAAGGGTCGACCTGTGATGGATTGGGGTATCAGGCTCAAAATTGCGATTGGATCGGCCAAAGGACTTGCTTATTTACATGAGGATTGTCACCCTCGTATCATTCATCGAGACATAAAGGGTGCAAACATTCTACTTGAAAACAATTTCGAAGCCAAAGTGGCAGATTTTGGGTTGGCAAAGTTCAGTCAAGACACCAACACTCATGTTTCTACTCGTGTAATGGGAACATTCGGGTATTTGGCTCCAGAGTATGCATCAACTGGTAAGCTAACTGAGAAATCTGATGTGTTTTCGTTTGGTGTTATGCTTTTGGAGCTTATAACAGGTCGGCCCCCAGTAGACAACACTGATGAATTTGAAGATAGTTTGATCGATTGGGCTAGACCCCTTTGTACAAAGGCAATGGAAGATGGAGGTTTTGAAGGACTTGTGGATCCACGCTTAGAGGGTAACTATGACAAGCAGCAAATGGTCTGTATGGTGGCTTGTGCTGCTGTTAGCATTAGGCACTCATCAAAGAAGCGCCCGAAAATGAGTCAGATTGTGCGAGTACTGGAGGGTGATGTGTCATTAGAAGTGCTTCATCACCAGGGAGTGAAACCTGGACACAGTACAGTGTTCGGCGAAACCGGGGAGTACGGTGCGGAGGCATACGGTGCTGACATGATGAAGTTCAGAAAACTAGCGTTAGATAGTGGCAGTGAGTATGGTGTAACCAGTGAATATGGCCTTAACCCTTCCGTCTCAAGCAGCGAACAATCTTCTGCAGAATATGGCAATTCCAGGAGGGTTATGAACATTGGACAGTGGGGGGTCGTGACACTAGAGGAGCCTCCTTTGTACATCTATGGGAAATTTGGAGTCGGAACAGAGATCTCACAGATTCACCGGTCATTGGTGATGGCTCAGCCGCTCGTGAAGAAGGACGATGACCGCGACGACGAAGCCGAGTATTCCCCCTTTCTGGGAATTGAAAAGGGGTCTGTTCTTCAGGAGGCCAGAGTTTTTAATGACCCTCAGCTAGATGCTAGGAGGTGTTCACAGGTTATTACAAAACTCCTATACCTACTGAATCAGGGCGAGACGTTTACAAAGGTTGAAGCAACAGAAGTTTTCTTTGCTGTTACTAAGCTTTTCCAGTCTAAAGATATGGGATTAAGGAGAATGGTCTACCTGATGATAAAGGAGATCTCTCCCTCTGCAGATGAGGTTATCATCGTGACAAGCTCTCTAATGAAAGATATGAATAGCAAAATTGACATGTATAAGGCGAATGCTATTCGAGTGCTTTGTCGAATCACTGATGGGACACTCCTTTCCCAAATTGAGCGGTATTTAAAACAAGCTATTGTTGATAAAAATCCAGTTGTTGCAAGTGCTGCTTTAGTTAGTGGCTTTCATTTGCTCCAGACAAATCCTGAAATTGTAAAAAGATGGAGCAATGAGGTTCAGGAAGCTGTTCAATCAAGAGCAGCCCTTGTACAATTTCATGCACTGGCTTTGCTACATCAGATTCGACAGAATGACCGGTTGGCAGTTAGCAAGCTAGTTACCAGCTTGACAAGGGGAAATGTTCGATCACCTTTAGCGCAGTGCCTTTTGATCCGTTACACTAGTCAGGTTATTTATGAGTCAGGCAATAATACACAGTCAGGGGAACGCCCCTTCTATGATTATCTTGAGAGTTGCCTTCGCCACAAGTCAGAGATGGTGATTTTTGAAGCTGCTAGGGCAATAACAGAGCTCAATGGTGTAACAGGTCGAGAATTAACTCCAGCAATTACTGTTCTTCAACTATTTTTAAGTTCTTCTAAGCCAGTCTTGAGATTTGCTGCTGTTCGCACCTTGAACAAGGTGGCAATGACACATCCAATGGCAGTAACGAACTGCAACATTGATATGGAAAGTTTAATCTCGGATCAGAACAGAAGCATTGCTACCCTCGCAATTACTACACTTTTGAAAACAGGAAATGAATCTAGTGTGGATCGTCTTATGAAGCAGATCACAAACTTCATGTCTGATATTGCTGATGAGTTCAAAATTGTTGTTGTTGAAGCAATAAGATCATTGTGCCTGAAGTTCCCTTTAAAATATCGATCCCTGATGAATTTCCTGAGTAATATTCTTAGGGAAGAAGGTGGTTTTGATTACAAGAAGGCAATTGTAGATTCAATTGTGATTCTCATTAGAGATATCCCTGATGCAAAGGAAGCTGGGTTGCTTCATCTTTGTGAGTTCATTGAAGATTGTGAGTTCACTTATTTGTCTACACAGATACTTCACTTCCTTGGAATTGAAGGACCAAAAACATCAGATCCAAGCAAATATATTCGTTATATTTATAATAGAGTGCATCTTGAGAATGCAATTGTTAGGGCCAGTGCCGTGAGTACACTGGCAAAATTTGGTGCTGCAGTTGATGCGTTGAAGCCCCGCATATTTGTTCTGCTAAGGCGATGTCTTTTTGACAGTGACGATGAGGTTCGTGATAGGGCAACGCTTTACCTGAACACACTTGGAGGTGATGGTTCAGTTGTTGAGACTGATAAGGATGTAAAGGACTTCCTGTTTGGGTCATTTGATATCCCACTTGTTAATCTGGAGAATAGTTTGAAAAATTATGAACCTTCAGAAGAAGCTTTTGACATTAACGCGGTGCCCAAGGAGGTCAAGTCCCAGCCACTTGCTGAAAAGAAAGCCCCTGGTAAAAAGCCATCTGGTTTGGGTGCTCCTCCAAGTGGTCCCTTATCAACTCTAGATGCATATGAGAAGATGCTTTCAACCATTCCAGAGTGTGGAAACTTTGGGAAACTTTTTAAGTCCTCAGCACCTGTGGAGCTCACTGAAGCTGAGACAGAATATGCAGTTAATGTCATTAAACACATTTTTGATAGGCATGTTGTGTTCCAGTACAACTGCACCAACACAATACCAGAGCAATTATTGGAAGATGTTATTGTGACTGTGGATGCTTCAGAAGCAGATGATTTCTCTGAGGTGTTCTCCAAGCCTATCAGGTCTCTTCCTTATGATTCACCCGGACAGACTTTTGTGGCATTTGAGAAGCCAGAGGGAGTGCCAGCAGTTGCAAAGTTTTCTAACATTCTGAAATTTATTGTTAAAGAGGTTGACCCTACCTCTGGCGAGGCTGAAGATGACGGTGTTGAAGATGAATACCAGCTCGAGGATCTGGAGGTTGTTGCTGCAGATTACGTGTTGAAAGTGGGGGTGTCTAATTTTAGGAATGCTTGGGAAAGCTTGGGCCCTGATTTTGAGCGAGTGGATGAATACGGTCTTGGTCCTAGAGAGAGCTTGGCTGAAGCTGTAAATACTGTTATCAACCTGCTTGGTTTGCAGCCCTGTGAGGGAACAGAGGAGGTTCCCCCCAATTCAAGATCACACACATGCTTATTGTCAGGTGTATTCATAGGGAATGTTAAGGTGCTTGTGCGGTTGTCTTTTGGACTTGATGGTCCAAAGGATGTTGCCATGAAACTTTCTGTCAGATCGGAGGATGAAACTGTCAGCGATGCCATTCATGAGATTGTGGCAAGTGGCTAG 4083 0.4445 MVHADNGFYKNGYGYNNNNKVEHVMNIPPPPGAAWAPPNRISSDVSSSGFSGPHGPVLPPPHPSVALGFNQSSFTYDELSAATGGFSQRNLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGGQGDREFQAEVDIISRVHHRHLVSLVGYCMSESKKILVYEFVPNKTLEYHLHGKGRPVMDWGIRLKIAIGSAKGLAYLHEDCHPRIIHRDIKGANILLENNFEAKVADFGLAKFSQDTNTHVSTRVMGTFGYLAPEYASTGKLTEKSDVFSFGVMLLELITGRPPVDNTDEFEDSLIDWARPLCTKAMEDGGFEGLVDPRLEGNYDKQQMVCMVACAAVSIRHSSKKRPKMSQIVRVLEGDVSLEVLHHQGVKPGHSTVFGETGEYGAEAYGADMMKFRKLALDSGSEYGVTSEYGLNPSVSSSEQSSAEYGNSRRVMNIGQWGVVTLEEPPLYIYGKFGVGTEISQIHRSLVMAQPLVKKDDDRDDEAEYSPFLGIEKGSVLQEARVFNDPQLDARRCSQVITKLLYLLNQGETFTKVEATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKIDMYKANAIRVLCRITDGTLLSQIERYLKQAIVDKNPVVASAALVSGFHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGNVRSPLAQCLLIRYTSQVIYESGNNTQSGERPFYDYLESCLRHKSEMVIFEAARAITELNGVTGRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFDYKKAIVDSIVILIRDIPDAKEAGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKTSDPSKYIRYIYNRVHLENAIVRASAVSTLAKFGAAVDALKPRIFVLLRRCLFDSDDEVRDRATLYLNTLGGDGSVVETDKDVKDFLFGSFDIPLVNLENSLKNYEPSEEAFDINAVPKEVKSQPLAEKKAPGKKPSGLGAPPSGPLSTLDAYEKMLSTIPECGNFGKLFKSSAPVELTEAETEYAVNVIKHIFDRHVVFQYNCTNTIPEQLLEDVIVTVDASEADDFSEVFSKPIRSLPYDSPGQTFVAFEKPEGVPAVAKFSNILKFIVKEVDPTSGEAEDDGVEDEYQLEDLEVVAADYVLKVGVSNFRNAWESLGPDFERVDEYGLGPRESLAEAVNTVINLLGLQPCEGTEEVPPNSRSHTCLLSGVFIGNVKVLVRLSFGLDGPKDVAMKLSVRSEDETVSDAIHEIVASG 1360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00154 1360 Pfam Protein tyrosine and serine/threonine kinase 89 292 IPR001245 GO:0004672|GO:0006468
Spst9g00154 1360 FunFam Coatomer subunit gamma 496 789 - -
Spst9g00154 1360 FunFam Coatomer subunit gamma 1242 1358 - -
Spst9g00154 1360 Gene3D Transferase(Phosphotransferase) domain 1 162 369 - -
Spst9g00154 1360 FunFam proline-rich receptor-like protein kinase PERK1 64 161 - -
Spst9g00154 1360 Gene3D - 810 1024 IPR011989 -
Spst9g00154 1360 Pfam Coatomer subunit gamma-1 C-terminal appendage platform 1243 1357 IPR032154 -
Spst9g00154 1360 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 1245 1357 IPR009028 GO:0006886|GO:0016192|GO:0030117
Spst9g00154 1360 FunFam Coatomer subunit gamma 1088 1241 - -
Spst9g00154 1360 Pfam Adaptin N terminal region 502 1013 IPR002553 GO:0006886|GO:0016192|GO:0030117
Spst9g00154 1360 MobiDBLite consensus disorder prediction 1066 1088 - -
Spst9g00154 1360 FunFam Coatomer subunit gamma 806 1014 - -
Spst9g00154 1360 SUPERFAMILY Protein kinase-like (PK-like) 65 358 IPR011009 -
Spst9g00154 1360 SUPERFAMILY ARM repeat 504 1034 IPR016024 -
Spst9g00154 1360 PANTHER COATOMER SUBUNIT GAMMA 474 1358 IPR017106 -
Spst9g00154 1360 ProSitePatterns Protein kinases ATP-binding region signature. 92 114 IPR017441 GO:0005524
Spst9g00154 1360 FunFam Proline-rich receptor-like protein kinase PERK1 162 369 - -
Spst9g00154 1360 SUPERFAMILY Clathrin adaptor appendage domain 1089 1244 IPR013041 -
Spst9g00154 1360 Gene3D - 1242 1358 IPR012295 -
Spst9g00154 1360 SMART serkin_6 86 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00154 1360 Gene3D Coatomer, gamma subunit, appendage domain 1089 1241 IPR037067 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Spst9g00154 1360 Gene3D Phosphorylase Kinase; domain 1 63 161 - -
Spst9g00154 1360 Pfam Coatomer gamma subunit appendage platform subdomain 1095 1240 IPR013040 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Spst9g00154 1360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Spst9g00154 1360 ProSiteProfiles Protein kinase domain profile. 86 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00154 1360 Gene3D - 496 789 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00154 Spst-Chr9 1320380 1334306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00154 64 431 Trihelix Transcription Factor Family AT1G70460 58.621 2.56e-137 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Spst9g00154 Adaptin_N 4.6e-128 CL0020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00154 K17267 - gmx:100814149 1638.62