Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00152 ATGGCCGCATCCGCCACCGTCTCCGGCGGTGCGCTGTCGGATCTAACTCACCCAACCCCCTTTCTCGGCCTGAAACTCTACGCCCTGCTCCTCATTTTAGTTATAATGGCGGTGGCAACGGTGCTCCTGATCCTCCTCTGCGTCCGCCGGAGCTCGAAGAAGCGGAAAATGCGAGTGAAGCACAGCTCCGGCGCGATCCCGCTGGTGTCGAAGGAGATCGTGGAGGTGAATGCTCTGGAGCTGAAAATCGAAGAGGTGGATGAGGAGGATCCGAAGAAGAAGGAGACGGAGCTTGAAGAGAGTGCGTCGGTGGAGTCACCGAACATAGGGTGGGGACGCTGGTATAGCCTCAGAGAGCTTGAGAGTGCGACGCAAGGGTTCGCGGAAGGGAATGTGATCGGAGAGGGAGGGTATGGGATTGTGTACAGAGGAGTTTTGCTCGACGGTTCTGTCGTCGCTGTCAAAAATCTTCTCAACAACAAGGGGCAGGCAGAGAAAGAGTTTAAGGTGGAGGTTGAGGCCATTGGAAAAGTGAGGCATAAGAATTTGGTGGGGTTAGTTGGATATTGCGCAGAAGGGGCTCAAAGGATGCTTGTTTATGAATATGTTGACAATGGAACATTGGAACAGTGGCTGCATGGTGAAGTAGGACCTGTTAGCCCCTTGACATGGGATATAAGAATGAAGATTGCTGTTGGGACTGCGAAAGGGCTAGCGTACTTGCATGAAGGATTAGAACCCAAAGTTGTCCACCGAGACGTAAAATCCAGTAACATTCTTTTGGACAAAAAGTGGAATGCTAAAGTATCAGACTTTGGACTGGCCAAGCTCTTGGGGCCTGAGAAAAGCTATGTGACAACGCGTGTAATGGGGACATTTGGATATGTGTCACCTGAGTATGCAAGCACGGGTATGCTTAATGAGGGCAGCGATGTGTACAGTTTTGGGATTCTACTTATGGAGTTAATTACTGGAAGGAGTCCCATTGATTATTCTAGACCACCTGGAGAGATGAACTTGGTTGATTGGTTTAAGGGAATGGTTGCAAGTCGTCGTGGTGATGAGCTAGTTGATCCTTTAATAGATATTCAGCCCTCTCAAAGATCTTTGAAACGAGCTTTACTGGTTTGTCTGCGCTGTATAGACTTGGATGTCAGTAAGCGACCAAAGATGGGCCAAATTGTTCATATGCTCGAGGCTGACGATTTTCCCTTTCGTTCTGAACATCGAGCAAATAGAGAGAAAGATCCCGTTCATTCTAATTCTGCTTCTAGCAAGATTCCATATCCAACAAGGCATATAGAGCCCGTAGATAAATCAAGCTGGAGATGA 1332 0.4865 MAASATVSGGALSDLTHPTPFLGLKLYALLLILVIMAVATVLLILLCVRRSSKKRKMRVKHSSGAIPLVSKEIVEVNALELKIEEVDEEDPKKKETELEESASVESPNIGWGRWYSLRELESATQGFAEGNVIGEGGYGIVYRGVLLDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGAQRMLVYEYVDNGTLEQWLHGEVGPVSPLTWDIRMKIAVGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKKWNAKVSDFGLAKLLGPEKSYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGILLMELITGRSPIDYSRPPGEMNLVDWFKGMVASRRGDELVDPLIDIQPSQRSLKRALLVCLRCIDLDVSKRPKMGQIVHMLEADDFPFRSEHRANREKDPVHSNSASSKIPYPTRHIEPVDKSSWR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00152 443 CDD STKc_IRAK 133 399 - -
Spst9g00152 443 FunFam Putative receptor-like serine/threonine-protein kinase 203 413 - -
Spst9g00152 443 ProSitePatterns Protein kinases ATP-binding region signature. 133 155 IPR017441 GO:0005524
Spst9g00152 443 Gene3D Transferase(Phosphotransferase) domain 1 203 419 - -
Spst9g00152 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Spst9g00152 443 SUPERFAMILY Protein kinase-like (PK-like) 107 399 IPR011009 -
Spst9g00152 443 MobiDBLite consensus disorder prediction 409 443 - -
Spst9g00152 443 FunFam Probable serine/threonine-protein kinase At1g01540 107 202 - -
Spst9g00152 443 ProSiteProfiles Protein kinase domain profile. 127 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00152 443 Coils Coil 69 89 - -
Spst9g00152 443 SMART serkin_6 127 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00152 443 PANTHER OS01G0323000 PROTEIN 98 421 - -
Spst9g00152 443 Pfam Protein kinase domain 129 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00152 443 Gene3D Phosphorylase Kinase; domain 1 85 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00152 Spst-Chr9 1308762 1311791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00152 107 399 Receptor kinase-like Gene Family AT4G02010 48.322 8.02e-94 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Spst9g00152 Pkinase 8.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00152 - - gmx:100779420 741.495