Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00151 ATGGGGATAGTGTGGTTTGGATTGTTGTTGTTGTTGCTGCTAAGTCAGGTGACATTGGAGCAGATTGAGCCACTGAGTTCCCCCGAGGAGCGAGAATCGTTGCTCGAACTGAGGGCTTCTCTGGGGTTGAGGAGCAGGGAATGGCCAAGAAAGCCAGACCCTTGTTTACTCTGGGTTGGCATCACATGCCAGAATGGTCGAGTCGTTGGGATCAATATCTCTGGGTTTAAAAGAACCAGACTTGGGAGGACGAACCCGCAATTTGCAGTGGATGCTTTGGCCAATTTCACTCTCTTGCAGTCCTTCAATGCCTCCACTTTCCTCCTTCCTGGCCCTATCCCTGATTGGTTTGGTCTCTCCCTTCCTTCTCTCAAAGTGCTTGATCTTCGTTCTTGTTCCATTGTTAATGCTATTCCCTCCACTCTTGGCAATTTGACCAACCTCACTAGTCTCTATCTCTCTGACAACAAACTCACTGGGAATGTTCCCGAGTCTTTGGGTCAACTCTCTGCCCTTTCGGTTCTTGATCTTTCCAGGAATTCTCTTGCTGGCACCATCCCAACGTCTTTTTCCCTTCTTGGGAATCTTTCCTCCCTTGACATGTCTGCCAATTTTTTGTTGGGGCCTATTCCCCCTGGCATAGGGTCTCTTTCCAGATTACAGTACTTGAATCTTTCCAACAATGGACTTGTTTCTTTGCCTGCCCAATTGGGAGGTCTCGCTAGCTTAGTTGACCTTGATCTTAGTAAGAATTCTTTTGCCAGTGGCGGGCTGCCTCCGGATTTGGCTGGGTTGAGGAACTTGCAGCGGATGATACTTGCAAACAGCATGCTCACTGGAGTTCTGCCGGGGAGATTGTTTACTGGTTCATTGCAGCTGCAATTCCTAGTGCTGAGGCAGAACAATTTCAGTGGTTCTTTGCCTGTTGAGTTGTGGTCTCTGCCAAGATTGAGCTTCCTTGATGTGTCTGCCAACAACTTCAGTGGTCTGCTTCCTAATTCGAGTTCGGCTGCTAATGTTACAGTTGCAGTGCTCAATATTTCGCATAATAAGTTTTATGGAGGTCTCACTCCTGCTTTAGGAAGGTTTGGTTTTGTTGATATTTCAAACAATTATTTTGAGGGTAAGGTTCTGGATTTCATGCATAATGTATCTCTGGATAGCAACTGTCTCCAGAATGAGACAAATCAGAGGTCAACGGTGGAATGTGCATCATTTTATGCAGAGAGGGGGCTCGGTTTTGATAATTTTGGTCAGCCGAACACGACAAAACCTCCTGCCTCTGAAAGCTCCAGAAAGAGCAATAAGACTAAGATTATATTGGCTGCAGTGCTGGGTGGGGTGGGTTTAATCGCACTTATGGTGTTGCTAGTCGTTTTGTTGCTTCTGTGTGCTCGTAAGAGGGGTAACTCAAATCAGAGAGGAAATGGTGTGGGTCCTGCTCCTGTTGGAAGCAGTCCTCCAAACCCTGGTGTACCAATAGAATTTCCAAAGGTAGGAGACTCGTTTACATATCATCAGTTGCTCCAGGCAACAGGAGATCTCAATGATGCAAATCTTATAAAACATGGCCACACTGGGGACTTCTTCAATGGTGTTTTGGAAAGTGGGATTCCTGTCGTCATCAAAAGGATCGACATGCGGTCTGCTAAAAAGGAGGCTTACCTGTCGGAATTGGACTTCTTCAATAAGGTTTCTCATCCGAGATTTGTTCCATTGTTAGGTCATTGCTTAGAAAATGAGAACGAGAAATTTCTGGTTTATAGAAACATGCCAAATCGGGACTTGTCTAATTGTTTGTACTACAAAAACACTACATCTGAAGATGGTACTTTGCAATCTCTAGACTGGATAACCAGGTTAAAAATTGCTACTGGGGCGGCAGAGGCCCTGTCGTATCTACATCATGAATGTATTCCACCCATTGTTCACAGGGATATTCAAGCAAGCAGTATACTTCTAGACGACAAATACGAAGTTCGGTTAGGGAGTCTAAGTGAAACCTGTGCTCAAGAAGGTGAAATTCATCAAAGTAAAATCACCCGGTTTCTGCGGTTTCCTCAGTCCTCTGATCAAGGCACATCTGGTTCTTCGACAACAATTTGTGCCTATGACGTTTATTGCTTTGGAAAAGTTTTACTTGAACTGGTGACGGGTAAGTTGGGAATGAGTGCAGCCAGTGACACGGAAGTAAGGGAATGTTTTGATCAGATTCTACCTTACATTAATATGAATGAGAAGGAGCTTGTGACGAAAATTGTGGATCCATCGATGGTAGTTGATGATGATTTCCTAGAGGAAGTATGGGCTATAGCCATTGTGGCCAGATCTTGTTTAAATCCGAAACCTACAAGGAGACCCCCAATGAGATATATTCTCAAGGCTTTGGAAAACCCTTTGAAAGTGGTGAGGGAAGAAAGTTCCAGTTCTGCACGGCTTAGAGCAACCTCTTCCAGAGGTTCTTGGAATGCTGCTACTTTGTTTGGGAGTTGGCGTCAGAGTTCTTCTGATGTAACAGCAACTCCAGCAGCCTCTGGTACAAAACTAGAAAGAGCTAGTAGTTTAAAGCTGTCAGGAACTACCGGCTCACAGTCACAGGGTAGTTTCCACAACGGCGGCGGTGAGATGTCGTCGTCACGGAGACGACACTCAAAGGAGATATTCCCGGAGCCATCTGGCAGTCATGATGTAGAGAGGTTGGAGCTGGAGTAG 2712 0.4554 MGIVWFGLLLLLLLSQVTLEQIEPLSSPEERESLLELRASLGLRSREWPRKPDPCLLWVGITCQNGRVVGINISGFKRTRLGRTNPQFAVDALANFTLLQSFNASTFLLPGPIPDWFGLSLPSLKVLDLRSCSIVNAIPSTLGNLTNLTSLYLSDNKLTGNVPESLGQLSALSVLDLSRNSLAGTIPTSFSLLGNLSSLDMSANFLLGPIPPGIGSLSRLQYLNLSNNGLVSLPAQLGGLASLVDLDLSKNSFASGGLPPDLAGLRNLQRMILANSMLTGVLPGRLFTGSLQLQFLVLRQNNFSGSLPVELWSLPRLSFLDVSANNFSGLLPNSSSAANVTVAVLNISHNKFYGGLTPALGRFGFVDISNNYFEGKVLDFMHNVSLDSNCLQNETNQRSTVECASFYAERGLGFDNFGQPNTTKPPASESSRKSNKTKIILAAVLGGVGLIALMVLLVVLLLLCARKRGNSNQRGNGVGPAPVGSSPPNPGVPIEFPKVGDSFTYHQLLQATGDLNDANLIKHGHTGDFFNGVLESGIPVVIKRIDMRSAKKEAYLSELDFFNKVSHPRFVPLLGHCLENENEKFLVYRNMPNRDLSNCLYYKNTTSEDGTLQSLDWITRLKIATGAAEALSYLHHECIPPIVHRDIQASSILLDDKYEVRLGSLSETCAQEGEIHQSKITRFLRFPQSSDQGTSGSSTTICAYDVYCFGKVLLELVTGKLGMSAASDTEVRECFDQILPYINMNEKELVTKIVDPSMVVDDDFLEEVWAIAIVARSCLNPKPTRRPPMRYILKALENPLKVVREESSSSARLRATSSRGSWNAATLFGSWRQSSSDVTATPAASGTKLERASSLKLSGTTGSQSQGSFHNGGGEMSSSRRRHSKEIFPEPSGSHDVERLELE 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00151 903 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 27 186 - -
Spst9g00151 903 ProSiteProfiles Leucine-rich repeat profile. 219 241 IPR001611 GO:0005515
Spst9g00151 903 Gene3D Transferase(Phosphotransferase) domain 1 591 818 - -
Spst9g00151 903 MobiDBLite consensus disorder prediction 472 491 - -
Spst9g00151 903 FunFam Predicted protein 485 590 - -
Spst9g00151 903 MobiDBLite consensus disorder prediction 836 875 - -
Spst9g00151 903 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 13 797 - -
Spst9g00151 903 SUPERFAMILY L domain-like 90 389 - -
Spst9g00151 903 Gene3D Ribonuclease Inhibitor 288 403 IPR032675 -
Spst9g00151 903 FunFam Putative LRR receptor-like serine/threonine-protein kinase 591 816 - -
Spst9g00151 903 SUPERFAMILY Protein kinase-like (PK-like) 488 796 IPR011009 -
Spst9g00151 903 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 289 419 - -
Spst9g00151 903 ProSiteProfiles Protein kinase domain profile. 515 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g00151 903 MobiDBLite consensus disorder prediction 836 903 - -
Spst9g00151 903 Gene3D Phosphorylase Kinase; domain 1 494 589 - -
Spst9g00151 903 PRINTS Leucine-rich repeat signature 217 230 - -
Spst9g00151 903 PRINTS Leucine-rich repeat signature 172 185 - -
Spst9g00151 903 Pfam Leucine rich repeat 195 252 IPR001611 GO:0005515
Spst9g00151 903 Pfam Leucine rich repeat 122 182 IPR001611 GO:0005515
Spst9g00151 903 MobiDBLite consensus disorder prediction 876 903 - -
Spst9g00151 903 Gene3D Ribonuclease Inhibitor 29 184 IPR032675 -
Spst9g00151 903 Gene3D Ribonuclease Inhibitor 185 287 IPR032675 -
Spst9g00151 903 Pfam Protein tyrosine and serine/threonine kinase 521 796 IPR001245 GO:0004672|GO:0006468
Spst9g00151 903 SMART LRR_typ_2 217 240 IPR003591 -
Spst9g00151 903 SMART LRR_typ_2 169 192 IPR003591 -
Spst9g00151 903 SMART LRR_typ_2 145 168 IPR003591 -
Spst9g00151 903 SMART LRR_typ_2 265 289 IPR003591 -
Spst9g00151 903 SMART LRR_typ_2 121 144 IPR003591 -
Spst9g00151 903 SMART LRR_typ_2 314 337 IPR003591 -
Spst9g00151 903 FunFam Leucine-rich repeat receptor protein kinase EMS1 187 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00151 Spst-Chr9 1297980 1302516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00151 30 688 Miscellaneous Gene Families AT2G16250 56.907 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Spst9g00151 PK_Tyr_Ser-Thr 1.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00151 - - gmx:100805769 1456.81