Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00138 ATGGAGAAAGTTACGGTGTCTAGGATTGGAAGCATGGAAGCAGATTCAATGGGCACAAAAGCCCATTATCAGGTAGCCCAGATGAGAGTTAATGCTCCAAAGAAGGACAAGGCCCCCCCACCTTCATCGAAGCCCGCCAAGTCTGGCGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAAAAGGTGAATAACATGGTACTGTTTGATCAGGGTACCTATGACAAGCTTCTCTCTGAGGCACCCAAATACAAGCTAATCACTCCTTCTATTCTCTCTGATCGTCTGAGGATCAATGGATCACTCGCAAGAAAAGCTATAAGAGATTTGATGGCTAGAGGTTCAATCAGGATGGTGTCTGCCCATGCAAGTCAATGTATTGCATGTAGCCCGGAAAGTTTTGTGACACTAGGAGAGGAATTGAGGGTTGCAGTTAACTGTGTCAACAAGGAAGAACGTGAAGAAGGAGCTCCCGTCCCGTCTGCTCCCAAGAAGGACAAGGCTCCCCCACCTTCATCAAAGCCCGCCAAGTCTGGCGGTGGCAAGCAGAAAAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAAAAGGTGAATAACATGGTGCTGTTTGATCAGGGTGCCTATGACAAGCTTCTCTCTGAGGCACCCAAATATAAGCTCATTACTCCTTCCATTCTCTCTGATCGTCTGAGGATTAATGGATCACTTGCGAGGAAGGCTATAAGGGAATTGATGGCCAGAGGATCAATTAGGATGGTGTGTGCTCATTCAAGTCAGCAGATTTACACTAGAGCTACAAACACCTAG 819 0.4713 MEKVTVSRIGSMEADSMGTKAHYQVAQMRVNAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRDLMARGSIRMVSAHASQCIACSPESFVTLGEELRVAVNCVNKEEREEGAPVPSAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGAYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGSIRMVCAHSSQQIYTRATNT 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00138 272 MobiDBLite consensus disorder prediction 156 198 - -
Spst9g00138 272 PANTHER 40S RIBOSOMAL PROTEIN S25 166 272 IPR004977 -
Spst9g00138 272 MobiDBLite consensus disorder prediction 1 64 - -
Spst9g00138 272 Pfam S25 ribosomal protein 172 269 IPR004977 -
Spst9g00138 272 Pfam S25 ribosomal protein 38 131 IPR004977 -
Spst9g00138 272 Gene3D - 51 135 - -
Spst9g00138 272 Gene3D - 185 272 - -
Spst9g00138 272 FunFam 40S ribosomal protein S25 51 136 - -
Spst9g00138 272 FunFam 40S ribosomal protein S25 185 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00138 Spst-Chr9 1119806 1128410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00138 166 271 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 91.509 1.48e-51 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00138 K02975 - gmx:100789867 157.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00138 9 1119806 1128410 Spst9g00138 9 1119806 1128410 ECH