Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00129 ATGGCTTCGTCGAGTGGAACATCTTCAGGGTCGTCTCTGCTTCAGAATTCGGGTTCAGAGGAGGACCTGCAGGCCGTGATGGATCAGAGGAAGAGAAAGAGAATGATATCGAACCGCGAATCGGCGAGGCGATCCCGAATGAGGAAGCAGAAGCACTTGGATGATCTGGCATCACTGGTGACTCAGCTGAGGAACGAGAATCACCAGATTCTCACATCGGTCAATCTCACCACCCAGAAGTACTTGGCGGTGGAGGCTGAGAACTCGGTGCTGAGAGCACAAGTGAGCGAGTTGAGCCACAGGTTAGAGTCTCTGAACGAGATCAACGACTTCTTGAACGCCACCAATGGTGCCTTTGGGCCTCCGGGCCCATCACCAACCTCCTTCTTTGAGCCCGAGGGTAGCACCTTCTTCAACAACCCTTTCAACATGGGTTATCTCAGCCAACCGATCATGGCTTCTGCAGATATGTTGCAGTACTGA 483 0.528 MASSSGTSSGSSLLQNSGSEEDLQAVMDQRKRKRMISNRESARRSRMRKQKHLDDLASLVTQLRNENHQILTSVNLTTQKYLAVEAENSVLRAQVSELSHRLESLNEINDFLNATNGAFGPPGPSPTSFFEPEGSTFFNNPFNMGYLSQPIMASADMLQY 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00129 160 Coils Coil 88 115 - -
Spst9g00129 160 MobiDBLite consensus disorder prediction 1 49 - -
Spst9g00129 160 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Spst9g00129 160 MobiDBLite consensus disorder prediction 24 49 - -
Spst9g00129 160 Pfam bZIP transcription factor 30 75 IPR004827 GO:0003700|GO:0006355
Spst9g00129 160 FunFam BZIP transcription factor 28 79 - -
Spst9g00129 160 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Spst9g00129 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Spst9g00129 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 158 - -
Spst9g00129 160 Gene3D - 28 82 - -
Spst9g00129 160 MobiDBLite consensus disorder prediction 1 23 - -
Spst9g00129 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Spst9g00129 160 SUPERFAMILY Leucine zipper domain 30 81 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00129 Spst-Chr9 1087559 1088041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00129 24 160 bZIP Transcription Factor Family AT4G34590 56.115 3.33e-47 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst9g00129 bZIP_1 4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00129 K25786 - gmx:100101862 221.09