Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00117 ATGATCATTCCGGAGAAGAACCGAAAGGAGATCTGCAAATACCTCTTCCAAGAGGGAGTTTGCTATGCGAAGAAGGACTTTAATTTGGCAAAGCACCCTGAGATTGACGTGCCTAATCTGCAGGTGATTAAGCTGATGCAAAGCTTCAAGTCTCGCGAGTACGTGAGGGAGACCTTTGCTTGGATGCATTATTACTGGTTCCTCACTAACGATGGCATCGAGTTTCTGAGAACTTACCTTAATCTTCCTTCCGAAATTGTTCCTGCAACTTTGAAGAAACAGGCCAAGCCACCTGGCAGGCCCTTTGGTGGCCCATCTGGTGATCGCCCTAGGGGTCCACCTCGCTTTGAAGGCGAGCGAAGGTTTGGTGGTGATCGCGATGGATATCGTGGAGGTCCCCGAGGACCTGGTGGAGAATTTGGAGGAGACAAGGGAGGAGCCCCAGCTGATTACAGGCCCTCTTTTGGGGGACCTGGCGGAAGGCCTGGCTTTGGTCGTGGATCTGGATCTGGATCTGGTGGTTTTGGAGCGCCAACCAGCTCAAATCTTCCTTAA 555 0.5153 MIIPEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPPGRPFGGPSGDRPRGPPRFEGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGSGSGSGGFGAPTSSNLP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00117 184 MobiDBLite consensus disorder prediction 112 128 - -
Spst9g00117 184 MobiDBLite consensus disorder prediction 91 184 - -
Spst9g00117 184 FunFam 40S ribosomal protein S10 1 104 - -
Spst9g00117 184 Pfam Plectin/S10 domain 3 94 IPR005326 -
Spst9g00117 184 Gene3D - 1 104 IPR036388 -
Spst9g00117 184 PANTHER 40S RIBOSOMAL PROTEIN S10 1 170 IPR037447 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00117 Spst-Chr9 944939 946459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00117 1 155 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 81.290 2.76e-75 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00117 K02947 K09422 gmx:100500445 224.172