Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00114 ATGGGAGAGGCAGGACGCGGTGGTTGGTGTCCGCCGATGGATCTGTTCCGGTCGGAGCCGATGCAACTCCTTCAGCTCATCATTCCCGTCGAATCCGCTCACCTCACCGTCTCTTACCTCGCTGAGCTTTGTCTTCTTCAATTCAAAGATCTCAATGCAGAGAAGAGTCCTTTTCAACGAACTTATGCAACTCAGATAAAAAGATGCGGAGAAATGGCTCGTAAATTGCGATTTTTGAAGGAGCAAATGTTGAAGAATGGTGTGTCACCTACTGGTTCAACAACACAGCCAGATGTAAACATTGATGATCTTGAGGTAAAACTTACAGAACTTGAGTCAGAATTAACTGAGATCAACGCCAACAGCGAAAAGTTGCAACGCTCTTACAATGAACTAGTGGAGTATAAGCTTGTTCTGCAGAAGGCTGGTGAATTTTTCCACTCGGCTCAAAGTGGTGCCATAGAGCATCAGAGAGAATATGAATCACAACATCAAATCGGTGAATCTATTGAAACACCTTTATTAGATGATCAAGAATTGTCCACTGATTCATCGAAGCAAGTTAGATTGGGGTTTTTAGCTGGTCTTGTCCCCAGGGAAAAGTCCATGGCATTTGAGAGAATTTTATTTCGTGCTACCAGAGGCAATGTCTTTTTTAGGCAGGCCATTGTTGAGGATCCTGTCACAGACCCTGTGTCTGGAGAACAGGTTGAGAAAAATGTGTTTGTGATCTTCTATGCTGGTGAGAAAGCAAAATCCAAGATTCTAAAAATATGTGAGGCATTTGGTGCTAATCGTTACCCTTTTACTGGGGAACTAGGAAAACAAGCTGAAATGATTTCAGAGGTTTCAGGAAGACTTCTGGAATTGAAAACCACAATAGATACTGGATTGCTGCACCGTTGCAACTTGCTACAGACTATTGGAGTTCAATTTGAGCAATGGAATCTTTTGGTGAGGAAGGAGAAAGCCATATACCATACACTGAACATGCTTAGCCTGGATGTGACAAAAAAATGTCTTGTGGCTGAGGGTTGGAGTCCTGTTTTCGCAACAAAGATGATCCAGGATGCATTGCAACGGGCAGCACTTGACTCTAACTCCCAAGTCAGTTCCATTTTCCAAGTCTTGCAAACTAGGGAGATCCCACCTACCTATTTTTGTACAAATAAATTTACTTCTCCATTTCAAGAAATTATTGATTCATACGGGGTTGCTAAGTATCGGGAGGCAAATCCTACGGTTTATACCATAATTACCTTTCCATTTCTTTTTGCTGTCATGTTTGGTGACTGGGGACATGGCATATGTTTACTACTGGGAGCTCTTTTTTTCATAATCAGGGAGAAGAAACTTTCTGGCCAGCTTGATAAACTTGGAGACATCACAGAGATGACTTTTGGTGGTCGTTATGTTATTATGTTGATGGCAATCTTCTCAATATATACTGGTTTGATCTATAATGAGTTCTTTTCTGTTCCATTTGAACTCTTTGGTCCTTCGGCATATGCATGTCGTGACCTTTCTTGCAGGGATGCTACAACAGTTGGCCTGATAAAAGTGCGTCGCACTTACCCATTTGGAGTGGACCCTGTATGGCATGGTACAAGAAGTGAATTACCATTTCTGAATTCATTGAAAATGAAAATGTCAATTCTTCTTGGGGTCGCCCAAATGAACCTTGGAATTATCATGAGTTATTGCAATGCCAAATTCTTTGGAAGTAGCGTGAATATATGGTTCCAATTTATTCCCCAAATGATATTTCTCAACAGTCTATTTGGTTACCTATCAGCTCTCATTATTGTGAAGTGGTGCACTGGTTCTCAAGCTGATTTGTACCACATATTGATCTACATGTTCCTGAGTCCTACAGATGATTTGGGTGAGAATCAACTCTTTGCTGGTCAAAAAATTCTGCAGCAAGTGTTTTTACTTCTGGCTGTTGTCTCTGTACCCTGGATGCTGATCCCAAAACCTTTTATTTTGAAGAAGCAACACGAAGATGTATGCTTCCGTTTGAACTTTACTCAAGCTCTGTTTGTTCCTTCAGAAATCATTTATCTTAGGTCTGATTCTGATAGTTTGTTACCTCAGAGGCAACGTGGTGAATCCTACGCGCCACTTCAAATCACAGAAGAGAGCGTGCAAATAGAGTCAAACCACGATTCCAATGGTCACGAGGAATTTGAATTCAGTGAAGTCTTTGTGCATCAACTCATACACACCATAGAATTTGTACTTGGAGCAGTCTCTAATACAGCTTCTTACCTTCGTCTATGGGCTCTAAGTCTTGCACATTCAGAGTTATCAAGTGTTTTCTACGAGAAGGTTCTCATTTTGGCATGGGGGTACAACAATGTGATCATCCTGATTGTGGGTTTTATTGTCTTCGCTTTTGCTACCGTTGGGGTGTTGCTTGTCATGGAAACTTTGAGTGCCTTCTTGCATGCTTTGCGACTTCATTGGGTAGAGTTCCAAAACAAGTTCTACGAGGGTGATGGTTACAAGTTCTACCCTCTCTCCTTCTCATTGCTGGATGGTGAGGATGACATGCTTTAA 2562 0.4161 MGEAGRGGWCPPMDLFRSEPMQLLQLIIPVESAHLTVSYLAELCLLQFKDLNAEKSPFQRTYATQIKRCGEMARKLRFLKEQMLKNGVSPTGSTTQPDVNIDDLEVKLTELESELTEINANSEKLQRSYNELVEYKLVLQKAGEFFHSAQSGAIEHQREYESQHQIGESIETPLLDDQELSTDSSKQVRLGFLAGLVPREKSMAFERILFRATRGNVFFRQAIVEDPVTDPVSGEQVEKNVFVIFYAGEKAKSKILKICEAFGANRYPFTGELGKQAEMISEVSGRLLELKTTIDTGLLHRCNLLQTIGVQFEQWNLLVRKEKAIYHTLNMLSLDVTKKCLVAEGWSPVFATKMIQDALQRAALDSNSQVSSIFQVLQTREIPPTYFCTNKFTSPFQEIIDSYGVAKYREANPTVYTIITFPFLFAVMFGDWGHGICLLLGALFFIIREKKLSGQLDKLGDITEMTFGGRYVIMLMAIFSIYTGLIYNEFFSVPFELFGPSAYACRDLSCRDATTVGLIKVRRTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIMSYCNAKFFGSSVNIWFQFIPQMIFLNSLFGYLSALIIVKWCTGSQADLYHILIYMFLSPTDDLGENQLFAGQKILQQVFLLLAVVSVPWMLIPKPFILKKQHEDVCFRLNFTQALFVPSEIIYLRSDSDSLLPQRQRGESYAPLQITEESVQIESNHDSNGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLILAWGYNNVIILIVGFIVFAFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFYPLSFSLLDGEDDML 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00114 853 Pfam V-type ATPase 116kDa subunit family 39 843 IPR002490 GO:0033179|GO:0046961|GO:1902600
Spst9g00114 853 PIRSF ATP6V0A1 11 852 IPR026028 GO:0000220|GO:0046961
Spst9g00114 853 Coils Coil 101 128 - -
Spst9g00114 853 PANTHER VACUOLAR PROTON ATPASES 15 846 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00114 Spst-Chr9 890264 900717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00114 13 851 Primary Pumps ATPases(2) AT4G39080 73.960 0.0 1263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00114 K02154 - gmx:100783125 1392.87