Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00085 ATGGCCATTAGAAAATCAAACAAGACTTCTCAGACCACAGTCCTCAAGCAAATCCTCAAGAGATGTTCCAGCTTAGGAAAGAAAAACGACTACGACCATGATGCTCTTCCTCTCGATGTCCCCAAAGGCCATTTCGCTGTCTACGTTGGAGAAAACAGAAGTAGATACATTGTCCCCATCTCCTTTTTGACTCACCCCCAGTTTCAGTCCCTCCTTCGTCAAGCTGAGGAAGAGTTCGGCTTCGATCACGATATGGGACTCACTATTCCCTGCCAAGAAGTTGTTTTCCGCTCTCTAACTTCCACTTTACGATGA 315 0.4603 MAIRKSNKTSQTTVLKQILKRCSSLGKKNDYDHDALPLDVPKGHFAVYVGENRSRYIVPISFLTHPQFQSLLRQAEEEFGFDHDMGLTIPCQEVVFRSLTSTLR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00085 104 Pfam Auxin responsive protein 27 102 IPR003676 GO:0009733
Spst9g00085 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 37 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00085 Spst-Chr9 655008 655322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00085 37 99 Calmodulin-binding Proteins AT3G43120 55.556 3.25e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00085 K14488 - qsu:112040183 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00085 9 655008 655322 Spst9g00085 9 655008 655322 ECH
Spst9g00085 9 655008 655322 Spst3g03804 3 88021514 88021828 ECH