Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00080 ATGGGTTTCCGTTTACCTGGTATTAAACGAGCATCTAAGGGGGCTGAAATCCCAAAAGGCTATCTTGCAGTCTATGTTGGAGATAGTATGAGACGGTTTGTGATTCCTATATCATACTTGAACCAACCTACTTTTCAAGATTTACTGAATCAATCAGAAGAAGAATTTGGATATTCTCATCCAACGGGTGGTCTCACAATCCCGCATCTGAGACAACACCATGCGATCTCTCATCTCATGGACCCCATCTTCTTGATCTTTCAGACATTTGAAATGGGTTTCCGTTTCCCTGCAATTAGAAGGACTTCATTTACTAGTAGCCCAGCATCTTCAAAAGCTGTAAATGTGCCAAAGGGCTATCTTGCAGTGTATGTAGGAGAGAGAATGAAGAGGTTTGTGATCCCCATGGCATACTTGAACCAACCTTCATTTCAAGACTTGCTGAGTCAAGCAGAGGAAGAATTTGGATACAATCATCCAATGGGCGGTCTCACAATTCCTTGCTCAGAAGATGTCTTTCTGCATATTACTTCTCAATTGGCTATAAGCTTATAG 555 0.4162 MGFRLPGIKRASKGAEIPKGYLAVYVGDSMRRFVIPISYLNQPTFQDLLNQSEEEFGYSHPTGGLTIPHLRQHHAISHLMDPIFLIFQTFEMGFRFPAIRRTSFTSSPASSKAVNVPKGYLAVYVGERMKRFVIPMAYLNQPSFQDLLSQAEEEFGYNHPMGGLTIPCSEDVFLHITSQLAISL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00080 184 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 111 180 IPR003676 GO:0009733
Spst9g00080 184 Pfam Auxin responsive protein 12 68 IPR003676 GO:0009733
Spst9g00080 184 Pfam Auxin responsive protein 102 178 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00080 Spst-Chr9 627847 629995 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00080 16 68 Calmodulin-binding Proteins AT3G43120 54.717 8.42e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00080 - K14488 vvo:131602130 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00080 9 627847 629995 Spst9g00080 9 627847 629995 ECH