Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00079 ATGGGTTTTCGCTTACCAGGAATTATTAGACGATCATCATTTAGTGCAAGCAAATCTTCTTCCAAGGTGTTGGAAGTTCCAAGAGGGTATCTAGCAGTGTATGTTGGAGAAAACATGAAGCGGTTCTTGATTCCAGTGTCCTTCTTGAACGAGCCTTTATTTCAAGAATTGCTGAGCGAAGCTGAAGAGGAGGTCCACATTGAATAG 207 0.4203 MGFRLPGIIRRSSFSASKSSSKVLEVPRGYLAVYVGENMKRFLIPVSFLNEPLFQELLSEAEEEVHIE 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00079 68 Pfam Auxin responsive protein 12 66 IPR003676 GO:0009733
Spst9g00079 68 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 65 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00079 Spst-Chr9 625747 627590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00079 25 64 Calmodulin-binding Proteins AT3G43120 60.000 6.75e-12 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00079 - K14488 gmx:113001440 94.3597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00079 9 625747 627590 Spst9g00079 9 625747 627590 ECH