Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00078 ATGGGTTTCAGTTTGCGTGGTCTTCAAAGGCGTGTGGATGTCCCAAAGGGCTGTGTAGCAGTGTATGTGGGAGAAAACCAGAAGAAGCGGTTTGTGATTCCCATATCATACTTGAACCAACCTTCATTTCTTGATTTGCTGAATCAATCTGAACAAGAATTTGGATTTGATCATCCAATGGGTTGCCTCACAATTCCTTGCACAGAAGATGTCTTCCTAGATGGCAGTGTAGCAGTGTATGTAGGAGAAAACCAAAAGAAGCGTTTTGTGATTCCCATATCATACTTGAACCAGCCTTCTTTTCAACAGTTTCTGAGTCAAGCTGAACAAGAATTTGGATTTGATCATCCAATGGGTGGCCTCACACTTCCTTGCAGAGAAGATGTATTTCAAGAAGTCACTTCTCGCTTGCACAGGCGATAG 423 0.4279 MGFSLRGLQRRVDVPKGCVAVYVGENQKKRFVIPISYLNQPSFLDLLNQSEQEFGFDHPMGCLTIPCTEDVFLDGSVAVYVGENQKKRFVIPISYLNQPSFQQFLSQAEQEFGFDHPMGGLTLPCREDVFQEVTSRLHRR 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00078 140 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 74 IPR003676 GO:0009733
Spst9g00078 140 Pfam Auxin responsive protein 12 72 IPR003676 GO:0009733
Spst9g00078 140 Pfam Auxin responsive protein 75 137 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00078 Spst-Chr9 607286 609759 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00078 13 72 Calmodulin-binding Proteins AT5G20810 55.000 1.38e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00078 K14488 - sspl:121749209 183.341