Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00073 ATGTCGTACTATACCTGTCATGTAATGATCATAGCTGTTGGGCACAGTGATGGAGAGTTCTCAATATTCTCTGCAGATTGCTTTGACCCGTTGGATCCAACTGGCAACATTTCCGTAACTTTTGACATTTACCAACGTACAGATAATGGATATTTGGCAAGGGTGACACTTCAAAACTACTATCAGTATCGGCATGTGGACAAGCCAGGGTGGAAGCTAGGATGGAGATGGGCTAACAATGAAGTGATATGGGATATGAGTGGTGCCATAGCAACTGATAGAGGGAATTGCTCATCTTACAGCGGCTCTCAGATGCCACATTCCTGCAAGAAAGATCCCATCATAGTTGATCTCTCTCCAGATGTCTCACAAAACAGGTCAGAGCATTGTTGCCGTGGTGGCCTCCTCTCTGCCTGGTCCATTGATCCTTTCAATGCTTTCTCTTCATTTGAACTTGAAGTGCGCAACGTGGGAGATAACCCACTTGGACAAGCACCTAACGATCTTACATTGATGGCCCCAGGTCCTGGCTACACTTGTAGCCCCCTTCTTGACACTGATCCCTCAGTGTCCTCAGACTTTGGGGGACTAAGACAAGTTCCTGTTCTCAGAACTTGGAAGTCAACATGTGCATACTCCAGTTTCTTAGCAAACACATTACCGGTATGCTGTGTTTCCCTCTCATCATTTTACAACCCCATCGTCACATCTTGCAGAAATTGCAGTTGTGGATGCAGAGAAGCAGATAAAAGTACAACTTCTTGCATAAGGCCTGGTCCCTTGTCACGGTCTAATGAGGATAACACGATTGAAATTGTTGAATGCACAGACCACATGTGTCCAGTTCGAGTCCATTGGCATTTCAAGAACAACTATATGAACCAATGGAGGGTGAAGCTTACAATTTCTAACTACAATTACAACAAAAACTACTCAAACTGGAACGTGCTGGTCCAACATCCTGGTTTCACTCAACAAACTTCAACTTACAGCTTCAACAGCACTAAACTTCCCACCCTTGGAAACCAAGATGGAGTTTCCCTCTTTTGGGGAATAGATTATTACAACAATGTGCTATTGCATTTTGATAAGGCTCAAGTAGGTGTTGTGTCAACAGAAATACTATTGGATAAAGATCCAAATTCTTTCACAGTGAGTAATGGATGGGCATTTCCTAGAAGAATATATTTCAATGGCGAGAACTGCGAAATGCCTTTACCTGACAAGTTTCCTATGTTGCCAAATCGCAGCTCCACTTTAAGACCTACCTATTGTGGTTTCACTCTTTTATTCATCCTTTTGTTTCTTCCCCTACTACATCCTTGGCTTTGA 1332 0.4317 MSYYTCHVMIIAVGHSDGEFSIFSADCFDPLDPTGNISVTFDIYQRTDNGYLARVTLQNYYQYRHVDKPGWKLGWRWANNEVIWDMSGAIATDRGNCSSYSGSQMPHSCKKDPIIVDLSPDVSQNRSEHCCRGGLLSAWSIDPFNAFSSFELEVRNVGDNPLGQAPNDLTLMAPGPGYTCSPLLDTDPSVSSDFGGLRQVPVLRTWKSTCAYSSFLANTLPVCCVSLSSFYNPIVTSCRNCSCGCREADKSTTSCIRPGPLSRSNEDNTIEIVECTDHMCPVRVHWHFKNNYMNQWRVKLTISNYNYNKNYSNWNVLVQHPGFTQQTSTYSFNSTKLPTLGNQDGVSLFWGIDYYNNVLLHFDKAQVGVVSTEILLDKDPNSFTVSNGWAFPRRIYFNGENCEMPLPDKFPMLPNRSSTLRPTYCGFTLLFILLFLPLLHPWL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00073 443 PIRSF COBRA 2 442 IPR006918 GO:0010215|GO:0016020
Spst9g00073 443 PANTHER PROTEIN COBRA 21 421 IPR006918 GO:0010215|GO:0016020
Spst9g00073 443 Pfam COBRA-like protein 51 213 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00073 Spst-Chr9 583268 586787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00073 25 435 COBRA Gene Family AT3G02210 46.919 4.81e-136 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00073 - - vra:106760500 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00073 9 583268 586787 Spst9g00073 9 583268 586787 ECH