Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00052 ATGCAACTCATCATTGTGGGTATTGAAGCAATGCGTAGAGCGATCTCCTTTCTCGTACAACCGAGATGCCTCCTTGTCGTCATTGTTCTCACAATTTTCGTGATTCTCGCAATATCTGGTTCCAGATGGGTTGAAGAGAAAGAAGAAGAAGAACCTGAAATTACAGACAGAGTATTCTTGGATGTTGATATTGATGGACAACGTTTAGGTAGGATTGTCATTGGATTATATGGCCAAGTTGTACCAAAAACTGTGGAAAACTTTAGAGCTTTGTGCACAGGGGAGAAAGGAAAGAATGCCAATGGTGTAAAACTTCATTACAAAGGAACACCATTTCATAGGATAATATCAGGTTTCATGTTTCAGGGTGGTGACATTGTTCATCATGATGGTAGAGGACATGAATCTATTTATGGTGCTACATTTCCTGATGAGAATTTCAAGATAAAACATTCGCATGCGGGTGTAATCTCTATGGTGAATTCAGGTCCTGATTCCAATGGCTCACAGTTTTTTATTACCACAGTGAAGACCAGTTGGTTAGATGGAGAGCATGTAGTGTTTGGGAAGGTTGTCCAAGGCATGGATAATGTGTTTGCAATTGAAGGGGGTGCTGGAACCTACGATGGGAAACCCAGAAAGAAAGTTGTCATTGCAGACTCTGGACTCTGGAGAGATACCCAAGAGTCTGTGGGATAG 699 0.4149 MQLIIVGIEAMRRAISFLVQPRCLLVVIVLTIFVILAISGSRWVEEKEEEEPEITDRVFLDVDIDGQRLGRIVIGLYGQVVPKTVENFRALCTGEKGKNANGVKLHYKGTPFHRIISGFMFQGGDIVHHDGRGHESIYGATFPDENFKIKHSHAGVISMVNSGPDSNGSQFFITTVKTSWLDGEHVVFGKVVQGMDNVFAIEGGAGTYDGKPRKKVVIADSGLWRDTQESVG 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00052 232 Gene3D - 44 231 IPR029000 -
Spst9g00052 232 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 57 222 - -
Spst9g00052 232 FunFam Peptidyl-prolyl cis-trans isomerase 44 229 - -
Spst9g00052 232 SUPERFAMILY Cyclophilin-like 54 226 IPR029000 -
Spst9g00052 232 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 107 124 IPR020892 GO:0003755|GO:0006457
Spst9g00052 232 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 62 220 IPR002130 GO:0000413|GO:0003755
Spst9g00052 232 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 59 223 IPR002130 GO:0000413|GO:0003755
Spst9g00052 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 155 170 IPR002130 GO:0000413|GO:0003755
Spst9g00052 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 183 198 IPR002130 GO:0000413|GO:0003755
Spst9g00052 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 91 IPR002130 GO:0000413|GO:0003755
Spst9g00052 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 170 182 IPR002130 GO:0000413|GO:0003755
Spst9g00052 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 112 124 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00052 Spst-Chr9 428055 433131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00052 70 224 U-box Gene Family AT5G67530 39.744 6.15e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00052 - - vra:106760817 408.297