Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00025 ATGCAAATGCCAAGTCCAACTATGAAGCAAACCAACGTTTCCGATCAGAACATGTCCAAGAATCACATCTCTCCCACCCGACACAAGTTTCGCTCTAGAAGGAGGAAAACCATTTCTGCTCGCCCCTTGGTCGCATATGATATCAACGACACTAACAGTCCCTACTACAAGGGTCTCACCGACCAATCCCTTGCTATTGTCGATGCCATACCCTCCTGCGCACAACCTCATCATCCTCATACCCCTCCCACTGACCTCCTTTCCAGTCCTTATTATAAAGGCCTTACAGACTATTCCCTTGCTCTTGGCCCTTGGAATCCTCACAACCATCCTATTCCTTTTCCCAACAGCTCCCTCTCATACCCCTCTAGTCCTTACTATAGAGGTCTTCTCACTGACTACTCCCTTGTACTTCATGCACCATCACTTCAACCTCCTTTCAATAACTTCCAACCTTCTATCAGAACTAGGGAAGGGCTAACGCCAAAACTCTCACTACCAAACATCAAGCCTGACTCTACTTTGAAGGACTTGATGGTCGATGCTGATCAAGTTGACTTTCTTCTTACCCAAGAAAGTAATGAAGTTGGGAATTGTGCATTATTGGAAGAACTTGGTGAGAAAACAACTCCGGAGGAGATTGAAAAAGGGGTTGATGAAGAGAAGCCATTGAGAGAGAATGGATCAGAGACGATCATGGTTGAGAGTGTGTTAGAGGACAAAGCAGAGAAAATGATGTTGGAGAAGATCGAAGAATTGATGACAGACGGGGTCAACGAGGATGTTAATATGGTGATTGAAGAGAAGCCATTGAGGGAGAGTGTATTAGAGCAGGCAAGTGATAAGGTTGAGGGTGTATTAGAAGAAACAATCTTGGATACGAAGATGATGACGAGTTATGATGTTATTGAAGAGAAGCCATTGAGGGAGAGAGTATCAGAAACAAGGGAGGATGTAGTGATGGATGTGCGGAAGGAAGAGGAAGGGAAAGGCTTGTCTGTTGTTTCTAAACAAGCAGTTGTTGTTGCATCAGAATCTCAATTGAAAGAGGGAAGAGATGTTTACGACTATATATGGGCAGCCAAATACCAACCCATGACCTTGGAAGAGTTCATCTGCAACAAAGATAAAGCACATTACCTCAAAACAATGGTAAAAAATGGTTGTGGGTGCAGTCACTTTATATTTGAAGGACCACCAAGTGTGGGAAAGAGATCCATGATCCGGGCTATGCTTCGAGAGGTATTTGGCGACGACAGGGTCCAGGTGACCGAAGAATATAAAAACTTCAATTTGAAGGGAGAAATGGTTGATAATGTGCAAGTGCGCGTGAAGAAATCACTCCATCATGTTGAGGTCAATCTGTCAGAGACAAATGGATACGAAAAGCATGTAATTGTTGATTTATTCAAGGAAACATATGGGGAGGTGGTAGATAACTCGCAGCCATGTTGCCCAGAAAACTGCAAAGCTATCGTTTTGTATGAGGCGGAGAGGCTATCGATAGAATCGTTGCTGTATATTAAGTGGCTACTGGAAAAGTATAAAGGGTGTAATAAGGTTTTCTTCTGTTGTTCTGATGAATCAAAGCTCCAACCTGTGAAGCCACTTTGCATCACTCTCCGCCTTTCATCACCATCAACCCAAGAGCTTTTCACCCGACAGCTTGTTCAAATTTTGGAAAATATTGCAAAAGAAGAAGGAATAGAGATATCACGCCACTTGGTGGAGAACATAATTTGGAGGTCCAAAAACAATCTATGCCAAGCCATTCGTTCATTGGAGGCCACTTGCCGAAACAAGGATGCTCTCAAAGACGACGATGTAATTCTAACTGGCTGGGAAGAAGATATTTTGGATATTGCCAAAAAAATAACCCAAGAGCAAAGTCCACGACAGCTGTACGCCATTCGTAGAAAGCTAAGAAGTCTTATGAGTCATGATGTTCCTGCTGACTTTGTTTACAAGTGTTTGGTACCAGAGTTAACTAATCTTATTCATCACTCGCTCCGACCAGGGGTTGTCAGACTCGACAGGGACTTCATGAGACCTTGTGAAACCAAATTTGAAACTATGAAGCAGCAGTTCTGTCATGCTCAAAGCAAACAAGCTGAATCTGATGAGAAGAGCACCGATTCAACCAAAAAGAATACCCTAACTTACTTAAAAGTAGAAGAGTTCATAGCGAAATTCATGAGCTGGTACAAGAATTGGTGTGAAAAAGACAATAAGCGGTAG 2238 0.4294 MQMPSPTMKQTNVSDQNMSKNHISPTRHKFRSRRRKTISARPLVAYDINDTNSPYYKGLTDQSLAIVDAIPSCAQPHHPHTPPTDLLSSPYYKGLTDYSLALGPWNPHNHPIPFPNSSLSYPSSPYYRGLLTDYSLVLHAPSLQPPFNNFQPSIRTREGLTPKLSLPNIKPDSTLKDLMVDADQVDFLLTQESNEVGNCALLEELGEKTTPEEIEKGVDEEKPLRENGSETIMVESVLEDKAEKMMLEKIEELMTDGVNEDVNMVIEEKPLRESVLEQASDKVEGVLEETILDTKMMTSYDVIEEKPLRERVSETREDVVMDVRKEEEGKGLSVVSKQAVVVASESQLKEGRDVYDYIWAAKYQPMTLEEFICNKDKAHYLKTMVKNGCGCSHFIFEGPPSVGKRSMIRAMLREVFGDDRVQVTEEYKNFNLKGEMVDNVQVRVKKSLHHVEVNLSETNGYEKHVIVDLFKETYGEVVDNSQPCCPENCKAIVLYEAERLSIESLLYIKWLLEKYKGCNKVFFCCSDESKLQPVKPLCITLRLSSPSTQELFTRQLVQILENIAKEEGIEISRHLVENIIWRSKNNLCQAIRSLEATCRNKDALKDDDVILTGWEEDILDIAKKITQEQSPRQLYAIRRKLRSLMSHDVPADFVYKCLVPELTNLIHHSLRPGVVRLDRDFMRPCETKFETMKQQFCHAQSKQAESDEKSTDSTKKNTLTYLKVEEFIAKFMSWYKNWCEKDNKR 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00025 745 Gene3D - 553 612 - -
Spst9g00025 745 Gene3D - 357 546 IPR027417 -
Spst9g00025 745 MobiDBLite consensus disorder prediction 1 36 - -
Spst9g00025 745 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 355 609 IPR027417 -
Spst9g00025 745 Gene3D - 613 735 - -
Spst9g00025 745 SUPERFAMILY post-AAA+ oligomerization domain-like 613 675 IPR008921 GO:0003677|GO:0006260
Spst9g00025 745 MobiDBLite consensus disorder prediction 1 23 - -
Spst9g00025 745 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 359 670 - -
Spst9g00025 745 FunFam Replication factor C subunit 3 357 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00025 Spst-Chr9 242235 245996 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00025 358 738 Core DNA Replication Machinery Family AT5G27740 27.273 9.96e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00025 K10756 - gmx:102664389 826.624