Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00011 ATGACGTGGAAGGTGGTGCTCATAGTGTTATTCATTGCGCTAACGTTCTGTCTGTCGCAATCCGCAGTTTTTAGCGTAGATCTTGGCTCGGAATCGGTAAAGGTGGCGGTTGTGAATCTGAAGCCCGGTCAGAGCCCGATCTCGATAGCCATCAATGAGATCTCAGAGCGGAATTCGCCGGCGCTGGTGTCTTTCCACGGAGGTCATCGCCTCCTCGCCGAGGAGGCCGCCGGCCTCGCTGCTCGCTGTCCGCCGAAGGCACGACCTCGTGGCGAAACCCTACGGTTCAGCGAAGAAGATTTTGGACTCAATGTATTTGCCTTTCGAGGCGAAGGAAGACTCCAGATGCGGCATGAATTTGGTCGCGGACGGAAACGGCGCCGTTTACTCGCCCGAGGAACTGGTGGCCGTGGTGTTGGGTTACGCGGCGAATTGGAGGAGTTTCACGCGAAGATTCCGATAAAGGACGCGGTGATCACAGTGCCACCGTATTTAGGGCAGGCTGAGCGGAGGGGGCTGGTGGTGGCGGCACAGTTGGCGGAGATTAACGTTCTGTCGTTGATAAACGAGCATTCCGGTGCGGCGGTGCAGTATGGGATGGACAAGAACTTCTTGAACGAGTCGAGGCACGTGATTTTCTATGACATGGGTTCCAGCAGTACCTATACGGCGCTTGTGTATTTCTCATCGGACATGATTAATGAGTATGGGAAGAGCGTGCCCGTGAACCAGTTTGAGGTTAAGGATGTCCGTTGGAACCCGGAGCTGGGTGAGTATTTTGCTGACGAGTTCAATGCACAAGTTGGTGGTGGAATAGATGTGAGGAATTTTCCCAGGGCTATGGCTAAATTGAGGAAACCGGCCAAACGAACAAAAGAAATTCTTAGTGCAAACACAGCTGCACCTATTTCAGTTGAACCGCTCCATGATGACGTGGACTTCAGGAGCACCATAACCCGCGAGAAATTTGAAGAGCTCTGTCAAGACATTTGGGAAAAATCTCTTTTACCTGTGAAAAAGGTGCTTCAGCATTCCGGCCTTTCATTGGAACGAATATATGCCGTGGAGTTGATTGGAGGTGCCACCAGAGTGCCTAAATTACAGGCTAAGCTTCAAGAATTCCTTGGGAGAAAAGAACTTGATAGGCATCTTGATGTTGATGAAGCAATTGTTCTTGGTGCAGCTCTGCATGCTGCAAATTTGAGTGATGGAATCAAATTGAATCGCAAACTAGGAATTGTTGATGATTCCTTATATGGATTTGTGGTCGAGTTTAATGGTCCTGATCATTTGAAAGATGAAAACCCTAGGCAGTTACTTGTACCACGGATGAAGAAAGTCCCGAGTAAGATGTTTAGATCAGTTAATCATGACAAAGACTTTGAGGTTTCACTAGCTTATGAAAGCGAGCACCATTTGCCTCCTGGTGTTACCTCTCCCGTAATTGCTCAATACCAGATATCTGGTTTGATAGATGCTGGTGAGAAATACTCATCTCGGAATCTGTCATCACCCATCAAGGCAAACATTCATTTTTCTCTTACTAGAAGTGGAATTCTTTCTCTGCACCGAGCAGATGCTGTAATTGAAATAACAGACTGGGTGGAAGTTCCCAGGAAGAATTTGACCAAAGAGAACTCAACCATTTCATCAAATGTTTCCACAGAAGCTGGTGCTAGTAACAGTTCCCAGGAAAACAGCCAAAACATGCAAACTGATAGTGGGATTAGTAAGTCATCTAACATTAGTGCAGCAGAGAAAGATGCCGCCGAGCCTGCTACAGATTAG 1788 0.4793 MTWKVVLIVLFIALTFCLSQSAVFSVDLGSESVKVAVVNLKPGQSPISIAINEISERNSPALVSFHGGHRLLAEEAAGLAARCPPKARPRGETLRFSEEDFGLNVFAFRGEGRLQMRHEFGRGRKRRRLLARGTGGRGVGLRGELEEFHAKIPIKDAVITVPPYLGQAERRGLVVAAQLAEINVLSLINEHSGAAVQYGMDKNFLNESRHVIFYDMGSSSTYTALVYFSSDMINEYGKSVPVNQFEVKDVRWNPELGEYFADEFNAQVGGGIDVRNFPRAMAKLRKPAKRTKEILSANTAAPISVEPLHDDVDFRSTITREKFEELCQDIWEKSLLPVKKVLQHSGLSLERIYAVELIGGATRVPKLQAKLQEFLGRKELDRHLDVDEAIVLGAALHAANLSDGIKLNRKLGIVDDSLYGFVVEFNGPDHLKDENPRQLLVPRMKKVPSKMFRSVNHDKDFEVSLAYESEHHLPPGVTSPVIAQYQISGLIDAGEKYSSRNLSSPIKANIHFSLTRSGILSLHRADAVIEITDWVEVPRKNLTKENSTISSNVSTEAGASNSSQENSQNMQTDSGISKSSNISAAEKDAAEPATD 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00011 595 PANTHER HSC70CB, ISOFORM G-RELATED 21 84 - -
Spst9g00011 595 Gene3D Actin; Chain A, domain 4 257 333 - -
Spst9g00011 595 SUPERFAMILY Actin-like ATPase domain 23 202 IPR043129 -
Spst9g00011 595 MobiDBLite consensus disorder prediction 546 584 - -
Spst9g00011 595 PRINTS 70kDa heat shock protein signature 384 404 - -
Spst9g00011 595 PRINTS 70kDa heat shock protein signature 54 66 - -
Spst9g00011 595 PRINTS 70kDa heat shock protein signature 157 177 - -
Spst9g00011 595 PRINTS 70kDa heat shock protein signature 22 35 - -
Spst9g00011 595 PRINTS 70kDa heat shock protein signature 352 368 - -
Spst9g00011 595 Pfam Hsp70 protein 150 571 IPR013126 GO:0005524|GO:0140662
Spst9g00011 595 ProSitePatterns Heat shock hsp70 proteins family signature 3. 355 369 IPR018181 -
Spst9g00011 595 Gene3D - 148 399 - -
Spst9g00011 595 MobiDBLite consensus disorder prediction 546 595 - -
Spst9g00011 595 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 409 580 IPR029047 -
Spst9g00011 595 Gene3D - 203 381 - -
Spst9g00011 595 FunFam Heat shock 70 kDa protein 4 252 333 - -
Spst9g00011 595 SUPERFAMILY Actin-like ATPase domain 206 401 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00011 Spst-Chr9 127543 129370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00011 26 402 Calmodulin-binding Proteins AT5G02500 29.620 4.68e-44 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00011 K09486 - gmx:100786898 834.713