Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00008 ATGGAGGGCTCAAAGGAAAATCGTGTGCCTCTGTTTCCGCTCATACCCTCTTCAAATCTTCAAGGCCGTTCAAGAATGGAGGAGAGTCTGAAGCCCCTCCATCACCGGTTGCCTCTCCGCAACATCAATCAGAATCTTATGCCTAATAAAAGCCCTCATTCCCGCAAGAGTAAAGCACACACAGTTCAGCACCACTACCCTCAGCCTCAAGCAACTAAGAAACAGAACCTGTTGTTGGCCCCCAACACGAGTTTCCACTTGGATTGTGAAATCATAGATATTCACGATGATGACGAGGATGCCGGTGACAACGCAGTTCCAGAATTCGTCAAGCATACTGAAGCCATGCTCGACGAAATAGATAGGATAGAGGAAGTTGAAATGCAAGATCTGCAAGAAACTGTTTTGGACATTGACGCCTACGATAGGAAAGATCCACTTGCAGTTGTTGAGTACGTAGATGATATCTACAGTCACTACAAGAATATTGAGAATTGGAGCTGTGTCTCTCCGAATTACTTCTCTAGTCACTTTGACATTAATGAGAGGATGAGGGCCATTCTTATCGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTCTGGAGGAGACATTGTTCCTTACTGTCAATCTCATAGATAGGTTCTTGGAGCGTCAGGTATTGATCCGTAAGAAGCTTCAGTTAGTTGGTGTAACAGCTATGCTAATAGCTTGTAAGTACGAGGAGGTCTCGGTCCCTACCGTCGAGGATTTTATTCTGATAACAGACAAGGCATATACAAGAAATGAAGTTTTAGAGATGGAGAAACTGATGGTGAACACCTTGCAATTCAAGTTGTCTGTGCCTACTCCATACATGTTCATGAGAAGATTTCTTAAGGCGGCTTATTCTGATAAGAAGCTGGAGTTCTTGTCCTTCTTCTTGGTTGAGCTTTGCTTAGTGGAATGCAAAATGCTGAAGTTTTCACCATCTTTGCTAGCTGCTGCAGCCATATACACAGCTCAATGTAGTATGTACCAGTTTAAGCAATGGACTAAGACCAGCGAGTGGTACACTGATTACTCAGAAGAGCAGCTTCTAGAATGCTCAAGGCTGATGGTTACTTTCCATCGGAAAGCTGGATCAGGGAAACTCACTGGTGTATGTAGAAAGTACAGTTCATGGAAGTATGGCTGTGCCGCAAAAATAGAACCAGCTCTGTTTTTACTGGATAATTAA 1221 0.4341 MEGSKENRVPLFPLIPSSNLQGRSRMEESLKPLHHRLPLRNINQNLMPNKSPHSRKSKAHTVQHHYPQPQATKKQNLLLAPNTSFHLDCEIIDIHDDDEDAGDNAVPEFVKHTEAMLDEIDRIEEVEMQDLQETVLDIDAYDRKDPLAVVEYVDDIYSHYKNIENWSCVSPNYFSSHFDINERMRAILIDWLIEVHYKFELLEETLFLTVNLIDRFLERQVLIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRNEVLEMEKLMVNTLQFKLSVPTPYMFMRRFLKAAYSDKKLEFLSFFLVELCLVECKMLKFSPSLLAAAAIYTAQCSMYQFKQWTKTSEWYTDYSEEQLLECSRLMVTFHRKAGSGKLTGVCRKYSSWKYGCAAKIEPALFLLDN 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00008 406 Pfam Cyclin, C-terminal domain 283 399 IPR004367 -
Spst9g00008 406 Gene3D - 169 281 - -
Spst9g00008 406 SMART Cyclin_C_2 283 400 IPR004367 -
Spst9g00008 406 SUPERFAMILY Cyclin-like 282 399 IPR036915 -
Spst9g00008 406 SMART cyclin_7 287 369 IPR013763 -
Spst9g00008 406 SMART cyclin_7 190 274 IPR013763 -
Spst9g00008 406 CDD CYCLIN_AtCycB-like_rpt2 283 399 - -
Spst9g00008 406 PANTHER CYCLINS 98 379 IPR039361 -
Spst9g00008 406 PIRSF Cyclin_A_B_D_E 15 406 IPR046965 GO:0016538|GO:0044772
Spst9g00008 406 CDD CYCLIN_AtCycB-like_rpt1 133 278 - -
Spst9g00008 406 FunFam G2/mitotic-specific cyclin-1 271 395 - -
Spst9g00008 406 Pfam Cyclin, N-terminal domain 155 281 IPR006671 -
Spst9g00008 406 SUPERFAMILY Cyclin-like 144 280 IPR036915 -
Spst9g00008 406 Gene3D - 155 396 - -
Spst9g00008 406 MobiDBLite consensus disorder prediction 43 62 - -
Spst9g00008 406 ProSitePatterns Cyclins signature. 185 216 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00008 Spst-Chr9 111586 113975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00008 45 404 Core Cell Cycle Gene Families AT1G20610 58.904 4.84e-151 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00008 K21777 - gmx:100812029 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00008 9 111586 113975 Spst9g00008 9 111586 113975 ECH