Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02399 ATGCCTAGAAGGTTTGGTTACAGCGAATTAGTTGCAGCGACCAACGGATTTGCAGACGATGAAGGCTCGGAGAAGGAGGCTCTGGACAAAAGAACTTTGAAATGGGGTGTGAGATACAATATTGCGTTAGGTGTGGCTAGGGCACTTCGTTATCTTCATGAAGAAGCGGAGCAGGGTGTTCTTCACAGGGATATAAAGTCAGAAAATGTTTTGTTAGACACAGATTTCAACACAAAGATTAGTGACTTTGGGATAGCAAAGTTGGTGGATTCAAGATTGAGGACTCAGAAGACAAAGGTGGTGGGGACATATGGGTACCTAGCTCCAGAATATATAAACGAAGGGAGGGTTAGCAAAGAATCTGACATGTACGGTTTTGGGGTGTTGGCTTTGGAAATAGCATGTGGAAGGAGGACTTACCAGGATGGGGAATATAATCATGTGCCTTTGAAGAATTGGGTGTGGAAACATTACTTGGATGGGAAGATTTTGAATGCTGCTGATGAGGAATTGAAGAGGGATTTTGATGTGAATGAAATGACATGCTTACTCACTGTAGGAATATGGTGTACCCTCCAAGACCACAAGGAAAGGCCAATGGCAGAACAGGTTATTAATGTTCTCAAACAAGAAGTGCCATTGCCAATGCTTTCTGCACAGCTGCAAAACATGCAGGATTCTCCCTCTGATCTTACCAATGGGTAA 705 0.434 MPRRFGYSELVAATNGFADDEGSEKEALDKRTLKWGVRYNIALGVARALRYLHEEAEQGVLHRDIKSENVLLDTDFNTKISDFGIAKLVDSRLRTQKTKVVGTYGYLAPEYINEGRVSKESDMYGFGVLALEIACGRRTYQDGEYNHVPLKNWVWKHYLDGKILNAADEELKRDFDVNEMTCLLTVGIWCTLQDHKERPMAEQVINVLKQEVPLPMLSAQLQNMQDSPSDLTNG 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02399 234 ProSiteProfiles Protein kinase domain profile. 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02399 234 SUPERFAMILY Protein kinase-like (PK-like) 29 216 IPR011009 -
Spst8g02399 234 SMART serkin_6 6 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02399 234 FunFam L-type lectin-domain containing receptor kinase IX.1 21 218 - -
Spst8g02399 234 PANTHER - 25 212 - -
Spst8g02399 234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 60 72 IPR008271 GO:0004672|GO:0006468
Spst8g02399 234 Gene3D Transferase(Phosphotransferase) domain 1 21 227 - -
Spst8g02399 234 Pfam Protein kinase domain 32 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02399 Spst-Chr8 35494667 35495601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02399 30 221 Receptor kinase-like Gene Family AT5G10530 47.959 1.22e-56 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst8g02399 Pkinase 1.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02399 - - vra:106763733 337.806