Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst8g02399 | ATGCCTAGAAGGTTTGGTTACAGCGAATTAGTTGCAGCGACCAACGGATTTGCAGACGATGAAGGCTCGGAGAAGGAGGCTCTGGACAAAAGAACTTTGAAATGGGGTGTGAGATACAATATTGCGTTAGGTGTGGCTAGGGCACTTCGTTATCTTCATGAAGAAGCGGAGCAGGGTGTTCTTCACAGGGATATAAAGTCAGAAAATGTTTTGTTAGACACAGATTTCAACACAAAGATTAGTGACTTTGGGATAGCAAAGTTGGTGGATTCAAGATTGAGGACTCAGAAGACAAAGGTGGTGGGGACATATGGGTACCTAGCTCCAGAATATATAAACGAAGGGAGGGTTAGCAAAGAATCTGACATGTACGGTTTTGGGGTGTTGGCTTTGGAAATAGCATGTGGAAGGAGGACTTACCAGGATGGGGAATATAATCATGTGCCTTTGAAGAATTGGGTGTGGAAACATTACTTGGATGGGAAGATTTTGAATGCTGCTGATGAGGAATTGAAGAGGGATTTTGATGTGAATGAAATGACATGCTTACTCACTGTAGGAATATGGTGTACCCTCCAAGACCACAAGGAAAGGCCAATGGCAGAACAGGTTATTAATGTTCTCAAACAAGAAGTGCCATTGCCAATGCTTTCTGCACAGCTGCAAAACATGCAGGATTCTCCCTCTGATCTTACCAATGGGTAA | 705 | 0.434 | MPRRFGYSELVAATNGFADDEGSEKEALDKRTLKWGVRYNIALGVARALRYLHEEAEQGVLHRDIKSENVLLDTDFNTKISDFGIAKLVDSRLRTQKTKVVGTYGYLAPEYINEGRVSKESDMYGFGVLALEIACGRRTYQDGEYNHVPLKNWVWKHYLDGKILNAADEELKRDFDVNEMTCLLTVGIWCTLQDHKERPMAEQVINVLKQEVPLPMLSAQLQNMQDSPSDLTNG | 234 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst8g02399 | 234 | ProSiteProfiles | Protein kinase domain profile. | 1 | 217 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst8g02399 | 234 | SUPERFAMILY | Protein kinase-like (PK-like) | 29 | 216 | IPR011009 | - | |
Spst8g02399 | 234 | SMART | serkin_6 | 6 | 214 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst8g02399 | 234 | FunFam | L-type lectin-domain containing receptor kinase IX.1 | 21 | 218 | - | - | |
Spst8g02399 | 234 | PANTHER | - | 25 | 212 | - | - | |
Spst8g02399 | 234 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 60 | 72 | IPR008271 | GO:0004672|GO:0006468 | |
Spst8g02399 | 234 | Gene3D | Transferase(Phosphotransferase) domain 1 | 21 | 227 | - | - | |
Spst8g02399 | 234 | Pfam | Protein kinase domain | 32 | 206 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst8g02399 | Spst-Chr8 | 35494667 | 35495601 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst8g02399 | 30 | 221 | Receptor kinase-like Gene Family | AT5G10530 | 47.959 | 1.22e-56 | 189 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Spst8g02399 | Pkinase | 1.9e-30 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst8g02399 | - | - | vra:106763733 | 337.806 |