Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02387 ATGGACAACATACCAAAACATATTGGATTCCACATCCAATTACTTGGACGAATTGATGAAGAAGGTGAACTCGATTTAGTTTTAAGAATGCCTTTTGTCTCGGCATTAGCGGTGGCAACGTGGACAGGCCTGCAGGCCTGCGGGCCTGCTCGCAAGCCCATCCTAAAAAGGAGTCTCATCACTCCAACTGAGTTGATAAAGATGAGTTTCAAGAGCAGCCCTAAAATTCAGCACAAGGGAGACTCTCCTTTCCTGTCTAGGCAATCATCCAACTCTAGTTTTAGGACCAATCCACAGAAGAATGCTGAGCCACGTATTGTGGGGTGCTGTGGAGGTTTCGGCAATGGTAAGACAATGGGGTCCTCTGCTTCCACATCTCCACAACATCCAAACCACCCACAGTACCTAATATTGCAAGAAAAGGTGGGAGATTTGGTGAAGGAGGTGCAGAAGCAAACAGAACAAAAAGTGATGTACAAGAAAAGAATGGAAAGGACACAAGACTACTTGAGATACTGTCTTCAGATAGCACAAGAAAATGGAATATTGGATCTCATTCTCAACTCAAAAGGTCAATTTCAACAATCTCCACTCTCTCTCCACGCCATTACCAGCCCTCAAATTCCAATTCAAAGTCCCTCTACTCCACCACACCATGCCAACCACCCCGATCTAGCCCCCATAATTCATCAAGCTAAAATCAATGGCTGGTATATTCATCCAAATGAGATTGAATTGGAAGAGAAAATCGGGGAAGGAAGCACCGCAGAGATTCACAGAGGAACATGGCGCGGATTTGAGGTCGCAGTGAAGTGCATTTCGCAAGACTTTTTCCGCACAAACGCCAACGGCGTCGTTTACTTCTCCCAGGAACTCGAAACGCTGTCGCGGCAGCGCCACAGGTTTGTGCTTCAGCTCATGGGCGCGTGCATCGACCCTCCCTGCCGCGCCTGGGTGGTCACCGAGTACCTGAGCACCACGCTGAAGGAGTGGCTCCATGGGCCTGGGAACCGGCGCAGGGAGCGGAAGGTGCCACTTCCACCCTTCCAGGACAGAGTGGGCCGGGCCTTGGAAATAGCCCAAGCCATGCAGTACTTGCACGAGCAAAAGCCCAAACTCCTTCACCGCGACTTGAAGCCCAGCAACATTTTTCTTGATGACGCCATGCACGTTAGAGTCGCCGATTTCGGCCATGCGCGGTTCTTGGGTGACCAAGAAATGGCCCTCACTGGAGAAACAGGAACATACGTTTACATGGCACCAGAAGTAATCCGATGTGAGCCTTATGATGAAAAGTGTGATGTGTACAGTTTTGGGATCATACTGAACGAGCTACTAACTGGAAATTACCCCTATGTTGAGACAGAATATGGTCCCACCAAGATTGCCATGGAAGTTGTGGAGGGTAAGCTTCGACCTAAGCTTCCACGTGATGATGTTGATAAATTGGGAGAACTTATTGACCTTATTTGTCTTTGTTGGGACCAAACTCCATCTACTCGACCATCCTTTGCCACAATCACCCTTTGCCTCAAAAGTTATGCCAAGAAGAAAATCCATTAA 1563 0.483 MDNIPKHIGFHIQLLGRIDEEGELDLVLRMPFVSALAVATWTGLQACGPARKPILKRSLITPTELIKMSFKSSPKIQHKGDSPFLSRQSSNSSFRTNPQKNAEPRIVGCCGGFGNGKTMGSSASTSPQHPNHPQYLILQEKVGDLVKEVQKQTEQKVMYKKRMERTQDYLRYCLQIAQENGILDLILNSKGQFQQSPLSLHAITSPQIPIQSPSTPPHHANHPDLAPIIHQAKINGWYIHPNEIELEEKIGEGSTAEIHRGTWRGFEVAVKCISQDFFRTNANGVVYFSQELETLSRQRHRFVLQLMGACIDPPCRAWVVTEYLSTTLKEWLHGPGNRRRERKVPLPPFQDRVGRALEIAQAMQYLHEQKPKLLHRDLKPSNIFLDDAMHVRVADFGHARFLGDQEMALTGETGTYVYMAPEVIRCEPYDEKCDVYSFGIILNELLTGNYPYVETEYGPTKIAMEVVEGKLRPKLPRDDVDKLGELIDLICLCWDQTPSTRPSFATITLCLKSYAKKKIH 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02387 520 SUPERFAMILY Protein kinase-like (PK-like) 218 507 IPR011009 -
Spst8g02387 520 Gene3D Phosphorylase Kinase; domain 1 232 324 - -
Spst8g02387 520 ProSiteProfiles Protein kinase domain profile. 244 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02387 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 373 385 IPR008271 GO:0004672|GO:0006468
Spst8g02387 520 MobiDBLite consensus disorder prediction 71 106 - -
Spst8g02387 520 ProSitePatterns Protein kinases ATP-binding region signature. 250 271 IPR017441 GO:0005524
Spst8g02387 520 SMART serkin_6 244 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02387 520 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 121 508 - -
Spst8g02387 520 Pfam Protein kinase domain 245 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02387 520 MobiDBLite consensus disorder prediction 82 100 - -
Spst8g02387 520 CDD STKc_MAP3K-like 250 508 - -
Spst8g02387 520 Gene3D Transferase(Phosphotransferase) domain 1 325 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02387 Spst-Chr8 35297037 35302843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02387 237 507 MAP Kinase Kinase Kinase AT4G35780 38.603 4.10e-51 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Spst8g02387 Pkinase 3.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02387 - - gmx:102666416 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02387 8 35297037 35302843 Spst8g02387 8 35297037 35302843 ECH