Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02386 ATGCCAATAAAAATGATGGTCATGCAATTGGAATGGTTATTTCCTTTTCCATGTGTAGCCATGATCACCCTGCTGGTTTTAGTTGGAGGCTTATTGGGTTATTTCTATGGGCCCTATTGGGGGCTAAGGAAAGTTCCAGGCCCACCATCTCTGCCTCTTGTAGGTCACCTTCACTTGCTGGCCAAATATGGCCCTGATGTGTTCTCACTCCTTGCCAAGCAATATGGCCCAATTTACAGATTTCACATGGGAAGACAACCACTAATCTTGGTAGCAGATCCAGAGCTTTGCAAAGAGGTGGGAATAAAAAAATTCAAAGACATTCCAAACAGAAGCATTCCCTCTCCTATTTCTGCCTCTCCTCTTCATCAAAAAGGCCTCTTCTTCACCAGGGGTTCAAGATGGTCAACCATGAGAAACACCATATTATCAATGTATCAACCATCACACTTGGCTGGTTTAGTGCCCATGATGCAATCACTCATAGAATCTGCAACACAAAATCTTGACACCTCAAATGAGGACATGATCTTTTCTAATCTTTCCCTGAGACTAGCAACTGATGTGATTGGAGAGGCAGCATTTGGTGTCAACTTTGGCCTCTCAAAGCCCCATTCAGTTTGTGAATCAATGAAGAATGTTAGCCATGTGAAAAATGATGATAATAATAATAGTGATGAAGTATCTGATTTCATTAATCAACACATTTACTCCACAACACAACTTAAGATGGATTTGTCTGGTTCCTTCTCCATTATACTTGGTCTACTTGCTCCAATACTTCAGGAGCCATTTAGACAGATTCTAAAGAAAATACCGGGTACAATGGATAGGAAAATAGAGAGTATTAATGAGAAATTGAGTGGTCGTCTTGATGAGATTGTTAAGAGGAGAATGGAGGACAAGAACCGAACATCAAAAAACTTCTTATCACTCATTTTGAATGCAAGAGAATCACAGATTGTGCCTGAAAATGTATTTTCACCTGACTACATTAGTGCAGTTACTTATGAGCACTTACTTGCTGGGTCAGCTACCACAGCCTTTACCTTGTCATCCATTGTCTACTTGGTGGCTGGCCATCTAGAAGTTGAGAAAAAGTTACTTCAAGAGATTGATAGATTTGGTCCAAGTGATAAGATTCTCACTGCTCAACATTTGCATGATAGTTTTCCTTATCTCGATCAGGTGATTAAAGAGGCCATGAGATTTTACACGGTTTCTCCACTGGTTGCAAGAGAGACCTTGAATGAGGTAGAGATCGGAGGTTATCTTCTTCCAAAGGGGACATGGGTATGGTTGGCTCTTGGAGTTCTAGCAAAAGATCCAATGAATTTTCCAGATCCAGAAAAGTTTAAACCAGAGAGGTTTGACCCCAACTGTGAAGAAATGAAACGAAGGCATCCTTATGCATTTATACCATTTGGAATTGGTCCTCGAGCATGTATTGGTAAAAGGTTTTCCCTCCAAGAGGTCAAGCTTACTCTGATTCATTTATACCGAAAATATGTGTTTCGCCACTCACTTGACATGGAAAAGCCTGTAGAACTGGAATATGGAATGGTTCTCAACTTCAAGCATGGTGTCAAGCTTAGAGTCATGAGAAGGACACAATAA 1617 0.4063 MPIKMMVMQLEWLFPFPCVAMITLLVLVGGLLGYFYGPYWGLRKVPGPPSLPLVGHLHLLAKYGPDVFSLLAKQYGPIYRFHMGRQPLILVADPELCKEVGIKKFKDIPNRSIPSPISASPLHQKGLFFTRGSRWSTMRNTILSMYQPSHLAGLVPMMQSLIESATQNLDTSNEDMIFSNLSLRLATDVIGEAAFGVNFGLSKPHSVCESMKNVSHVKNDDNNNSDEVSDFINQHIYSTTQLKMDLSGSFSIILGLLAPILQEPFRQILKKIPGTMDRKIESINEKLSGRLDEIVKRRMEDKNRTSKNFLSLILNARESQIVPENVFSPDYISAVTYEHLLAGSATTAFTLSSIVYLVAGHLEVEKKLLQEIDRFGPSDKILTAQHLHDSFPYLDQVIKEAMRFYTVSPLVARETLNEVEIGGYLLPKGTWVWLALGVLAKDPMNFPDPEKFKPERFDPNCEEMKRRHPYAFIPFGIGPRACIGKRFSLQEVKLTLIHLYRKYVFRHSLDMEKPVELEYGMVLNFKHGVKLRVMRRTQ 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02386 538 PANTHER THROMBOXANE-A SYNTHASE 19 537 - -
Spst8g02386 538 Gene3D Cytochrome P450 36 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02386 538 PRINTS P450 superfamily signature 342 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02386 538 PRINTS P450 superfamily signature 482 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02386 538 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02386 538 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02386 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Spst8g02386 538 PRINTS E-class P450 group I signature 351 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02386 538 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02386 538 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02386 538 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02386 538 PRINTS E-class P450 group I signature 331 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02386 538 PRINTS E-class P450 group I signature 435 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02386 538 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02386 538 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02386 538 SUPERFAMILY Cytochrome P450 38 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g02386 538 Pfam Cytochrome P450 46 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02386 Spst-Chr8 35280044 35283248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02386 83 536 Cytochrome P450 AT2G26170 71.711 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02386 K20771 - gmx:100805689 939.873