Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02385 ATGGGTGCATCTGGAAAATGGGTGAAGGCGTTGATCGGACTTAACAGCAAGAACGAACTTGGTGGGAAGAAGAAGAAGTGGAGGCTGTGGAAGAGTTCTTCTGCAGGGGAGAACAGATCTCCAGACTTCGACTATGGCAGTGTAGCTTCCGATTCTTTCACCGCTGCAGTTGCCACCGTTGTCAGAGCTCCACCTAAGGATTTCAAACTCCTCAAGCAAGAATGGGCCGCTACCCGAATCCAAACTGCTTTCCGTGCCTTCTTGGCAAGAAGAGCATTGAGGGCGTTGAAGGGAGTGGTCAGGCTTCAAGCACTTGTAAGGGGTAGACTTGTGAGGAAGCAGGCTGCAGTCACATTGAGGTGCATGCAGGCCTTGGTTCGTGTCCAGGCACGTGTGAGGGCACGGCGCGTGCGAATGTCCATTGAGGGGCAAGCAGTGCAGAACATGCTCAATGAACGCCGCACCAAGGCTGAACTCTTCAAGGAAGCTGAGGAAGGGTGGTGTGATAGCAGAGGATCATTGGAGGATGTCAAGACAAAACTACAGATGAGGCAAGAGGGAGCTTTCAAGAGGGAGAGAGCAATTGCATACTCTCTTTCCCACAAGCAATGGAGATCAACCCCCATTTCAAATTCAAGAGCTAATACCTCTCTCAACAAGCAAGAGATGGACAAGGCTAACTGGGGATGGAGTTGGTTGGAACGTTGGATGGCTGCAAAGCCGTGGGAGAGTAGACTAATGGAACAAGCTCATCATCGTGCTGATGCCACCGAGAAGACCCCTCCTCCTCCAAAGAAATGTGTGAACTCCTCAAATTCAAAAAATAATTCTGATTCATGCAATGTCAAAGTCAGAAAGAACAATGTCACCACAAGGGTCTCAGCTAGACCTCCCCATATTGGCCAAACCACTCGCTCATCCTCAAGTCCTAGTTCTGAGTTTCACTATGATGAGAGCTCTAATTCATCTTCAATATGCACATCCATGACTCCGATATCTGGTAGTGCTTCATTGCCTTGTGACAGGATAGAGGATAGTAACAACAGTTCTACTAGGCCTAGTTACATGAACCTAACCGAATCAACCAAGGCAAAGCAGAAAACCAGCAATCATCAATACAATAGATCTCAGAGGCAACAGTCCATGGATGAGTTCCAGTTTCTCAAAAGGACAGCGGTTTTCTCAAATGGAGATTCCAAAAGCACTGATGCTTCTGACCCTTCAACCAACTTTTCTAGGCCACTTTACTTACCCACCTACATGGATAAGAAGTCACGGTGA 1281 0.4793 MGASGKWVKALIGLNSKNELGGKKKKWRLWKSSSAGENRSPDFDYGSVASDSFTAAVATVVRAPPKDFKLLKQEWAATRIQTAFRAFLARRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQNMLNERRTKAELFKEAEEGWCDSRGSLEDVKTKLQMRQEGAFKRERAIAYSLSHKQWRSTPISNSRANTSLNKQEMDKANWGWSWLERWMAAKPWESRLMEQAHHRADATEKTPPPPKKCVNSSNSKNNSDSCNVKVRKNNVTTRVSARPPHIGQTTRSSSSPSSEFHYDESSNSSSICTSMTPISGSASLPCDRIEDSNNSSTRPSYMNLTESTKAKQKTSNHQYNRSQRQQSMDEFQFLKRTAVFSNGDSKSTDASDPSTNFSRPLYLPTYMDKKSR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02385 426 PANTHER IQ-DOMAIN 5-RELATED 1 395 - -
Spst8g02385 426 Pfam IQ calmodulin-binding motif 97 114 IPR000048 GO:0005515
Spst8g02385 426 Pfam IQ calmodulin-binding motif 75 94 IPR000048 GO:0005515
Spst8g02385 426 ProSiteProfiles IQ motif profile. 97 124 IPR000048 GO:0005515
Spst8g02385 426 MobiDBLite consensus disorder prediction 264 415 - -
Spst8g02385 426 MobiDBLite consensus disorder prediction 248 426 - -
Spst8g02385 426 ProSiteProfiles IQ motif profile. 73 101 IPR000048 GO:0005515
Spst8g02385 426 SMART iq_5 95 116 IPR000048 GO:0005515
Spst8g02385 426 SMART iq_5 72 94 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02385 Spst-Chr8 35276985 35279494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02385 1 423 IQD Protein Family AT2G26180 59.545 8.23e-142 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02385 - - gmx:100787102 652.129