Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02376 ATGAATCTGCTCCAGGGCTCTAAGGTTTGGGTCGAGGACCGGGATTCGGCTTGGCTACCCGCTGAAGTGCTCGATTCCGACGGTGACAAGCTTCAGCTCGTAACTGATTCTGGCAAGAAGGTGTTTGCTTCCAAGGAGAAACTCCTCCCGAGGGATGCGGATGAAGAGGAGCATGGCGGATTCGAAGACATGACGAGGTTGGCGTACTTGAACGAGCCGGGAGTGTTGTTCAATCTTCGGAGAAGATACGCGCTCAATGATATCTATGTTTTAGCAGCTTTTGGATTTCTCCAGTATGGTTATGTGGTTGTTTGGCTTACAAGGAGCATTTTAATAGCTGTTAATCCATTCACAAAGCTTCCTCATTTATATGATTCCCATATGATGGAGCAATATAAGGGAGCTCCATTGGGTGAACTTAGCCCACATGTTTTTGCTGTTGCCGATGCATCTTATAGAGCAATGATGAATGAAGGTAAAAGTCAATCTATCTTGGTCAGCGGTGAAAGTGGAGCTGGAAAAACTGAGACAACAAAATTGATTATGCAGTATCTTACCTTTGTTGGTGGACGTGCTGCTGGTGATGATAGAACAGTTGAACAGCAAGTTCTTGAATCCAATCCACTTTTAGAGGCATTTGGTAATGCAAGGACTTCCCCCAAAAACATTGCCAACTGCCTCCTAGGTCACTACTGGTCTTGCGGAAATGTGGAAAGTTGCTGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAATGGTAGAATATCTGGTGCTGCAATTAGAACTTACTTACTGGAAAGATCACGAGTAGTGCAGATAACGGATCCAGAGAGAAATTATCACTGCTTTTATCAGTTGTGTGCATCTGAAATGGATGCAGAGAAGTATAAGTTAGGAGATCCAAGTCACTTCCACTATCTAAATCAAAGTAAAATCTATGAATTAGATGGTGTAAGCAACACAGAAGAATACCTGAAGACAAGGAGGGCAATGGATATTGTCGGCATTAGTCACGAGGATCAGGAATCCATATTTCGTGTCTTAGCTGCAATTTTACATTTGGGAAACATTGAATTTTCTCCTGGAAAAGAGCACGACTCGTCGGTAGTAAAAGATGACAAATCAAGATTTCATATGAAGATGGCTGCTGATCTTTTCATGTGTGATGTAAATGTACTGCTGGCAACATTGTGTACTCGTTCAATCCAAACTCGTGAAGGCAATATTGTCAAGGCCCTTGATTGCAATGCTGCTGTTGCTGGCCGTGATACCTTGGCAAAAACTGTTTATGCCCGTTTATTTGATTGGCTTGTTGATAAGATCAATAGGTCTGTTGGGCAAGACCTCAATTCCAAGATACAGATTGGAGTTTTGGATATTTATGGTTTTGAGTGCTTTAAGGATAACAGTTTTGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTGTTCAAGATGGAGCAGGAGGAGTATGGCAAAGAAGAAATTAACTGGAGTTACATTGAATTTGTAGATAACCAAGATGTTTTAGATTTAATTGAAAAGCACTTCCGATCTCACCCTAGGCTGGAAAAGGAAAAGTTTTCACAAACAGATTTTACTATTTCTCATTATGCTGGAAAGGTCACATACCATACTGATACCTTTTTAGACAAAAATCGTGATTATGTTGTAGTAGAACATTGCAATCTATTATCTAGTTCAAAATGCCCTTTCGTTTCTCGTCTTTTTCCTTTGCTTCAAGAAGAATCTTCAAGATCATCATACAAGTTTTCTTCAGTAGCTGCCAGATTTAAGCAACAACTTCAAGCACTCATGCAGACCCTAAACTCAACAGAGCCTCACTACATAAGATGTGTGAAACCAAATTCTTTAAACCGACCACAAATATTTGAAAATGCAAGCGTCATACACCAGTTACGCTGCGGGGGCGTCCTTGAGGCAGTTCGGATAAGTCTTGCAGGTTATCCTGCACGAAGAACTTACTCAGAGTTTGTAGATCGCTTTGGGTTAATAGCCCCTGAATTTCTGGATGGAAGTTATGATGATAAGGCTGCAACTGAGAAAATTTTGCTAAAGCTTAAGCTTGAGAATTTTCAGCTGGGTAGGACCAAAATATTTCTCAGGGCTGGGCAAATTGGTATTTTAGACTCGAGACGTGCTGAAGTTTTAGACAATGCTGCAAAGTGTATTCAGTGCCGATTGAGGACATTTATGGCACATCGGGATTTCATATTTTTAAGAGATGCTGCATTATCACTTCAGGCATGCTGCAGAGGTCACATTGCTCGAAAGATATATGCTGCTAAAAGGGAGACAGCAGCAGCTATCTCTATTCAGAAATATATTCGAATGTGGCTGACAAGGCATGCTCACTTAAAACTGTATTTTTCTGCAATTGTCATACAATCTCGTGTTCGAGGTTTTGTGACTCGCCAAAGATTCTTACATGCAAAAGAACATAAAGCTGCTACTTTTATTCAGGCCTGTTGGAGGATGTCCAAGGTTAGGTCATCTTTTCTAAGACATCAAGCTTCAATTGTGGCAATACAATGCCTTTGGCGGTGTAGACAAGCAAAAAGAGAGTTACGAAGACTTAAACAAGAGGCAAATGAGGCTGGTGCTCTCCGATTAGCTAAGAATAAACTGGAGAAGCAATTGGAAGATCTAACATGGCGTTTGCATCTTGAAAAGAAAATAAGGGTTTCTAATGAAGAGGCTAAAAGACTAGAGATTTCAAAACTTCAAAAGATGTTAGAAGCTTTGAATCTTGAATTAGATGCTGCTAAATTGGCAAAAATTAATGAGTGCAACAAGAATGCGGTTCTGCAAAATCAATTGGAATTGTCAGTCAAGGAGAGGTCCGCTTTGAAAAGAGAGCTAGTAGCAGTGGATGAATTGCGCAAGGAAAATGCTTTATTAAAGGTTTCATTGGATGCATTTGAAAATAAGTACAAGAACTTAGAGCTTGGGCTTATGAATGCTCAAAAAGGTCGGGATGAAAACATGGAGAAACTGAGGGAGTTTGAACAGAAGTGCTCTCTGCTTGAGCAAAATGAGAAAAAGCTTGAGGAAAAGTTAACGAGTTTAGAGAATGAAAATCATGTGCTTCGTCAAAAAGCCTTAAGTACCCCTCTTAAGAGTAACCGTCCAGGTTTTGCCAAGTCAATGTCAGAAAAATACTCAAGTGCAATCACCTCTCGCACTGAACGAAAGACCATATTTGATAACTATGACTTTCTCTCTAAGTGTATAAAAGAAAATTTGGGATTCAAAAATGGTAAACCTATTGCTGCTCGTATTATATATAAATGTCTGCTTCATTGGCATTCATTTGAATCTGAGCGCACAACCATTTTTGATTCCATCATCGAAGGAATAAATGAAGTTTTAAAGGTTAGGGAGGATGACATTGTCCTGCCATATTGGCTGTCCAATACCTCTGCGCTTCTATGCCTTTTACAGAGAAACTTACGTTCAAATGGTTTTTTAACTACTACTGCTCAGCGTTATCCTGGATCATCTGGTTTGTCCAACCGTACTGGGCATGTTTGGTCAGAAAATGGAGGTCTGACTGCTGAGGTTGGAACTGACAATAACAACACTATTGTCTGCAGGATGGCTGCTGTTCAGCTAAGTTTTTGTTTGGGACCAAAATCTTCATTGCAGTTTATTGGATATGATGATGGTGCATCGCATGTGGAGGCGAGATATCCTGCTATACTTTTTAAGCAACAACTAACTGCTTGTGTAGAGAAGATTTTTGGTCTTCTACGTGACAATTTGAAAAAAGAACTTTCTCCACTTCTGGGATCATGTATTCAGGCACCCAAAACAGGACGAGGAGTGCAGGGGGGGAAATCATCTAGGTCTCCTAGTGGGATTCCCCATCTATCGTCTGGTGGTCAGTGGGATAACATTGTCAAATTTTTGGATTCGCTCATGAGCAAACTTCGTGAAAATCATGTGCCATCCTTCTTCATCCGTAAACTGGTTACCCAGGTCTTTTCCTTCATCAATATAACACTCTTCAACAGTCTTCTTTTGCGTCGAGAGTGTTGCACTTTCTCAAATGGTGAATATGTGAAGTCTGGTCTAGCTGAACTGGAGAAGTGGATAGTCAATGCAAAGGAGGAGTATGCAGGGACATCCTGGCATGAGTTGAATTACATACGACAAGCTGTAGGCTTCTTGGTAATTCATCAGAAAAGGAAGAAATCTTTGGAAGAGATTCGGCAAGATCTTTGTCCGGCATTGACAGTGAGGCAAATCTATCGAATCAGTACGATGTACTGGGATGACAAGTATGGAACCCAAAGTGTGTCCAATGAGGCAAGTGGTGTGGTTAGTGAAATGAGAGAAATTGTCAGCAAGGACAATCAAAATCTGACATCAAATTCTTTCTTATTGGATGATGATCTGAGCATTCCTTTTTCTGCTGAAGACATAGATATGGCTATTCCTGCCATAGATCTTGATGAGATTCATCTTCCAGAATTCGTGTCTGAATATTCCTGCGCTCAGTTTCTCAGTTCACATCAGAAGTAA 4578 0.4045 MNLLQGSKVWVEDRDSAWLPAEVLDSDGDKLQLVTDSGKKVFASKEKLLPRDADEEEHGGFEDMTRLAYLNEPGVLFNLRRRYALNDIYVLAAFGFLQYGYVVVWLTRSILIAVNPFTKLPHLYDSHMMEQYKGAPLGELSPHVFAVADASYRAMMNEGKSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTSPKNIANCLLGHYWSCGNVESCCRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASEMDAEKYKLGDPSHFHYLNQSKIYELDGVSNTEEYLKTRRAMDIVGISHEDQESIFRVLAAILHLGNIEFSPGKEHDSSVVKDDKSRFHMKMAADLFMCDVNVLLATLCTRSIQTREGNIVKALDCNAAVAGRDTLAKTVYARLFDWLVDKINRSVGQDLNSKIQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYGKEEINWSYIEFVDNQDVLDLIEKHFRSHPRLEKEKFSQTDFTISHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSSSKCPFVSRLFPLLQEESSRSSYKFSSVAARFKQQLQALMQTLNSTEPHYIRCVKPNSLNRPQIFENASVIHQLRCGGVLEAVRISLAGYPARRTYSEFVDRFGLIAPEFLDGSYDDKAATEKILLKLKLENFQLGRTKIFLRAGQIGILDSRRAEVLDNAAKCIQCRLRTFMAHRDFIFLRDAALSLQACCRGHIARKIYAAKRETAAAISIQKYIRMWLTRHAHLKLYFSAIVIQSRVRGFVTRQRFLHAKEHKAATFIQACWRMSKVRSSFLRHQASIVAIQCLWRCRQAKRELRRLKQEANEAGALRLAKNKLEKQLEDLTWRLHLEKKIRVSNEEAKRLEISKLQKMLEALNLELDAAKLAKINECNKNAVLQNQLELSVKERSALKRELVAVDELRKENALLKVSLDAFENKYKNLELGLMNAQKGRDENMEKLREFEQKCSLLEQNEKKLEEKLTSLENENHVLRQKALSTPLKSNRPGFAKSMSEKYSSAITSRTERKTIFDNYDFLSKCIKENLGFKNGKPIAARIIYKCLLHWHSFESERTTIFDSIIEGINEVLKVREDDIVLPYWLSNTSALLCLLQRNLRSNGFLTTTAQRYPGSSGLSNRTGHVWSENGGLTAEVGTDNNNTIVCRMAAVQLSFCLGPKSSLQFIGYDDGASHVEARYPAILFKQQLTACVEKIFGLLRDNLKKELSPLLGSCIQAPKTGRGVQGGKSSRSPSGIPHLSSGGQWDNIVKFLDSLMSKLRENHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEASGVVSEMREIVSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAIPAIDLDEIHLPEFVSEYSCAQFLSSHQK 1525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02376 1525 Gene3D Myosin VI head, motor domain, U50 subdomain 335 446 - -
Spst8g02376 1525 SMART MYSc_2a 53 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst8g02376 1525 Coils Coil 950 970 - -
Spst8g02376 1525 Gene3D - 280 334 - -
Spst8g02376 1525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 781 828 IPR027417 -
Spst8g02376 1525 Coils Coil 915 942 - -
Spst8g02376 1525 Gene3D - 665 732 - -
Spst8g02376 1525 SMART DIL_2 1340 1447 IPR002710 -
Spst8g02376 1525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 825 880 IPR027417 -
Spst8g02376 1525 Coils Coil 866 903 - -
Spst8g02376 1525 CDD MYSc_Myo11 73 719 IPR036018 -
Spst8g02376 1525 Gene3D - 784 831 - -
Spst8g02376 1525 Gene3D - 733 783 - -
Spst8g02376 1525 Gene3D - 832 881 - -
Spst8g02376 1525 Pfam DIL domain 1341 1444 IPR002710 -
Spst8g02376 1525 Pfam IQ calmodulin-binding motif 783 801 IPR000048 GO:0005515
Spst8g02376 1525 Pfam IQ calmodulin-binding motif 831 850 IPR000048 GO:0005515
Spst8g02376 1525 Pfam IQ calmodulin-binding motif 758 777 IPR000048 GO:0005515
Spst8g02376 1525 Pfam IQ calmodulin-binding motif 808 825 IPR000048 GO:0005515
Spst8g02376 1525 Gene3D Kinesin motor domain 623 661 IPR036961 -
Spst8g02376 1525 MobiDBLite consensus disorder prediction 1289 1310 - -
Spst8g02376 1525 Pfam Myosin head (motor domain) 62 525 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst8g02376 1525 ProSiteProfiles IQ motif profile. 808 834 IPR000048 GO:0005515
Spst8g02376 1525 PANTHER MYOSIN 808 1454 - -
Spst8g02376 1525 Gene3D Myosin VI head, motor domain, U50 subdomain 566 600 - -
Spst8g02376 1525 ProSiteProfiles IQ motif profile. 853 882 IPR000048 GO:0005515
Spst8g02376 1525 ProSiteProfiles Dilute domain profile. 1131 1464 IPR002710 -
Spst8g02376 1525 Gene3D Kinesin motor domain 60 467 IPR036961 -
Spst8g02376 1525 Gene3D - 468 526 - -
Spst8g02376 1525 PRINTS Myosin heavy chain signature 208 235 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst8g02376 1525 PRINTS Myosin heavy chain signature 104 123 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst8g02376 1525 PRINTS Myosin heavy chain signature 509 537 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst8g02376 1525 PRINTS Myosin heavy chain signature 456 484 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst8g02376 1525 PRINTS Myosin heavy chain signature 161 186 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst8g02376 1525 Coils Coil 974 1050 - -
Spst8g02376 1525 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Spst8g02376 1525 ProSiteProfiles Myosin motor domain profile. 59 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst8g02376 1525 SMART iq_5 733 755 IPR000048 GO:0005515
Spst8g02376 1525 SMART iq_5 829 851 IPR000048 GO:0005515
Spst8g02376 1525 SMART iq_5 756 778 IPR000048 GO:0005515
Spst8g02376 1525 SMART iq_5 781 803 IPR000048 GO:0005515
Spst8g02376 1525 SMART iq_5 804 826 IPR000048 GO:0005515
Spst8g02376 1525 SMART iq_5 852 874 IPR000048 GO:0005515
Spst8g02376 1525 CDD MyosinXI_CBD 1086 1491 IPR037975 GO:0007015
Spst8g02376 1525 Gene3D - 528 622 - -
Spst8g02376 1525 FunFam Myosin heavy chain 280 334 - -
Spst8g02376 1525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 781 IPR027417 -
Spst8g02376 1525 ProSiteProfiles IQ motif profile. 757 786 IPR000048 GO:0005515
Spst8g02376 1525 MobiDBLite consensus disorder prediction 1292 1310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02376 Spst-Chr8 35135727 35171334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02376 1 1520 Myosins gene family AT4G33200 66.603 0.0 2065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02376 K10357 - gmx:100790815 2584.68