Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02346 ATGCATATCCTGTTTAATAAAAGGGTACCGGTGAGATTAAGGTTTCTTCTTCTTCCACTTCAATCAATTCCTTTATTTATCCATTCCCCGTCCCTTATTCTTCCTTTTCAGGACTTCTTCTGCCTCCCGCGCCTCCACAACGTCTTCTCAGAATCGTTTTTGCAGTCTTTAGGCGATTCCGTTACAACTTCGAGTTGCAAAAGCACGGAGTTGGAGCAATGTCGCGACGAGTCAGCGGCGTTGGTTTTGAAATTCGTGGCGATGGCGTCGATTATGGTGGCCGGGTTTGGGGGGATCGCGATTCCTCTGGCGGGGAAGTCGCGGCGGTTGCTGCGGCCGGACGGGGACGCGTTCACGGCGGCGAAGGCGTTCGCGGCGGGGGTGATTCTAGCGACGGGGTTCGTGCACATGCTGAGAGACTCGTGGGAGGCGCTGGGGAACCCGTGTCTGAGGACGCGCTGGGGCGCGTGGGGGAAGTTTCCCTTCACCGGTTTCTTCGCCATGGTGTCCGCGCTCTGCACTCTCCTCGTTGACTTTATGGCGACTGGGTACTACGAGCGGAAGGAGGGGCGTCGGCGCGTGGAGCGTGCAAAGGTTGTTGATGAGTTTGGGAGTGACGAGGAGGCGTTGTTGGAAACGGGAATTGTGGAGGTCATGGACGTTGGGGGAGAGGGAAGGCACCCCGCGCAGCGTACACACTCCCACTCGCACCACTGTGATGACGTGGAAAGTACCGTTCGGCACGTCGTCGTTTCACAGGTATTGGAACTAGGGATTGTATCCCATTCGATGATAATTGGGTTATCTCTAGGAGTTTCTCAAAGTCCTTGTACCATGAGACCCTTAATTGTGGCATTATCCTTCCATCAGTTCTTCGAAGGATTTGCACTTGGTGGATGTATCTCCCAAGCCCAATTCAAGACCTTATCAGCAACAATAATGTCATGTTTTTTTGCTCTAACAACGCCCTTAGGAGTTGCCATTGGGGCTGGTATTGCTTCAGTTTTTAACCCTTTCAGTCCAGGGGCACTCATAACTGAAGGCATCTTGGACTCTTTGTCAGCTGGGATTTTAATGTACATGGCTTTAGTGGACATAATAGCTGCAGATTTTCTTAGCAAGAAAATGCGTGGCGACTTTAGGCTTCAGATTACATGTTACTGCTTGCTTTTTCTAGGTGCTGGATTGATGTCTTCACTCGCAATTTGGGCATAA 1215 0.5152 MHILFNKRVPVRLRFLLLPLQSIPLFIHSPSLILPFQDFFCLPRLHNVFSESFLQSLGDSVTTSSCKSTELEQCRDESAALVLKFVAMASIMVAGFGGIAIPLAGKSRRLLRPDGDAFTAAKAFAAGVILATGFVHMLRDSWEALGNPCLRTRWGAWGKFPFTGFFAMVSALCTLLVDFMATGYYERKEGRRRVERAKVVDEFGSDEEALLETGIVEVMDVGGEGRHPAQRTHSHSHHCDDVESTVRHVVVSQVLELGIVSHSMIIGLSLGVSQSPCTMRPLIVALSFHQFFEGFALGGCISQAQFKTLSATIMSCFFALTTPLGVAIGAGIASVFNPFSPGALITEGILDSLSAGILMYMALVDIIAADFLSKKMRGDFRLQITCYCLLFLGAGLMSSLAIWA 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02346 404 NCBIfam ZIP zinc/iron transport family 66 404 IPR004698 GO:0005385|GO:0016020|GO:0071577
Spst8g02346 404 PANTHER ZINC/IRON TRANSPORTER 80 397 - -
Spst8g02346 404 Pfam ZIP Zinc transporter 83 401 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02346 Spst-Chr8 34576599 34579586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02346 57 404 Inorganic Solute Cotransporters AT1G10970 59.574 7.43e-145 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02346 K14709 - gmx:100809426 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02346 8 34576599 34579586 Spst9g00603 9 5311059 5312833 PCT