Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02309 ATGATGGCCCTAAACCCGTACTCAAAACCCTTTGCACTTATTAACTTCCTCCTCTTCTTATTAGGTAATGTAGCATCTGCCACAGTGTTTACCCTCCAAAACCGTTGCAGTTACACAGTTTGGCCGGGGACACTTTCCGGCAACGGCGCCACTCTCGGCGACGGCGGTTTCCCCCTTGCGCCAGGTAAGTCAGTTCAACTCACCGCCCCGTCCGGCTGGTCCGGCCGGATCTGGGCCCGGACCGGCTGCAGCTTCGACGGATCCGGTATCGGAACATGCGACACAGGAGACTGCGCCGGCGGAGTGAGATGTATCGGAGGAGGCGTTCCGCCGGCGACTCTGGCGGAGTTCACCGTCGGATCCGCCAGTAACGGCGACAAGGACTTCTACGACGTGAGTCTCGTGGATGGTTACAATGTAGGCATCGGCGTGCTGGCTACCGGAGGAACAGGTGACTGCCAGTACGCAGGGTGCGCGGCGGATTTGAACGCCGTATGTCCGGAGGAGCTGCAGGTGAGAAACGGCGACGGCGCGGTGGTGGCGTGCAGGAGCGCGTGCGCCGCGTTTAACACGGCGGAGTTTTGCTGCACCGGCGAGCACGGGACACCGCAAACGTGTTCGCCGACACGTTATTCGGAGATTTTCAAGAATACGTGTCCAACAGCGTACAGTTACGCTTACGATGACGCTTCCAGCACTTGCACCTGTTCTGGATCTGATTATGTTATCTCTTTTTGTCCTTGA 744 0.582 MMALNPYSKPFALINFLLFLLGNVASATVFTLQNRCSYTVWPGTLSGNGATLGDGGFPLAPGKSVQLTAPSGWSGRIWARTGCSFDGSGIGTCDTGDCAGGVRCIGGGVPPATLAEFTVGSASNGDKDFYDVSLVDGYNVGIGVLATGGTGDCQYAGCAADLNAVCPEELQVRNGDGAVVACRSACAAFNTAEFCCTGEHGTPQTCSPTRYSEIFKNTCPTAYSYAYDDASSTCTCSGSDYVISFCP 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02309 247 SMART tha2 30 247 IPR001938 -
Spst8g02309 247 FunFam Thaumatin-like protein 1a 28 247 - -
Spst8g02309 247 ProSitePatterns Thaumatin family signature. 89 104 IPR017949 -
Spst8g02309 247 Pfam Thaumatin family 34 247 IPR001938 -
Spst8g02309 247 SUPERFAMILY Osmotin, thaumatin-like protein 29 247 IPR037176 -
Spst8g02309 247 PIRSF PR5 1 247 IPR001938 -
Spst8g02309 247 ProSiteProfiles Thaumatin family profile. 27 247 IPR001938 -
Spst8g02309 247 Gene3D Thaumatin 28 247 IPR037176 -
Spst8g02309 247 PANTHER OS03G0233200 PROTEIN 17 247 IPR001938 -
Spst8g02309 247 CDD TLP-PA 29 246 - -
Spst8g02309 247 PRINTS Pathogenesis-related protein signature 55 64 IPR001938 -
Spst8g02309 247 PRINTS Pathogenesis-related protein signature 29 41 IPR001938 -
Spst8g02309 247 PRINTS Pathogenesis-related protein signature 89 118 IPR001938 -
Spst8g02309 247 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Spst8g02309 247 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02309 Spst-Chr8 34057359 34059126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02309 11 247 Receptor kinase-like Gene Family AT5G38280 46.185 4.45e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02309 - - gmx:100807814 424.861