Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02305 ATGAATCACGTAGCATTTCTCTTCTTCACTATATCCTTTTTTCTTCTTTCTTTTGATGGCAAAGCACAGCAAAACTACTCTGGGATTTCAATATTCAGCTGCAAGAATGATGAGAAAATGGGGCCCTCAACCTCGTTCCTTTATACCTGCAATGGCCTCAACAAATCCTGCATGGCCTTCCTAATCTTCAAATCCAAACCTCCTTTAAACTCCATACTCACAATTTCCAACCTCACATCATCAAACCCAGAAGAGCTTGCAAGAATCAATGATGTCACTGTGCTCACAGTGTTCCCAACGGGGAAAGAAGTGATTGTACCTTTGAAATGTTCTTGTTTAACTAGGGACTACTACCAAACTGAAACCAAATATGTATTGGGACCATCCCCAACATATTTCACAGTGGCAAATGATACTTTTCAGGGTTTGACCACCTGTGATTCCCTTAAGCGTACTAATCCATATGGGGAACTTGATTTGCTTCCTGGCATGGAGTTGCACGTGCCACTCAGATGTGCTTGTCCAACATTGCATCAGGTCACAAACGGCACCAAGTATTTACTGACATACTCAGTGAACTGGGGTGATAACATTACAAATATTGCTACAAGGTTCAATGTAGCAGCAGGTAATGTGGTCGATGCCAATGGTTTTAACACACAAACACAAACTCTTTATCCATTCACAACTGTTCTGATTCCATTATCAAGTGAACCTCTGACTTCAATGACCACAGTTGTTAGTGATCCACCAAATATGTCACATCTTCCTGTTTGCAGCTCCATAAAGTGCGAGTCAAAGAGGAAATTCCATGCTGCTATTGCCGCCACAGGGGGTTCCATTGTGGCTCTGTGCGCTGTTTTGTATGGGGTTTTTCTGTTTAGAAAGAGCTCTGCAAGGTTCGTTAAGAGAGATGAAGAAGGTGAGAAAGCAAAGAAAATGTCCTCAGAAGATATCCGTGGTGAGATAGCAATCATTGGGCATCATTCCAAAGTGTACAAGTTTGAGGAAATAATGGAGGCCACTGAAAATTTTAGTTCAAAGAATAGAATTAAAGGTTGTGTGTTTCGTGGGGTATTTGGTAATGACAACAACATATTGGCTGTGAAAAAAATGAGAGGAGATGCATCCAAGGAAGTGAATCTGCTGGAAAGGATCAATCATTTCAACCTGATAAAGCTGCAAGGTTACTGTGAAAACGATTCTTGTCCTTATCTTGTTTATGAGTACATGGAAAATGGCTCTTTGAGAGAATGGCTAAGGGGAAACAGGTCTACCGAGCACCAGATTTTGGCAAAGAGGATTCTGATTGCTCTGGATATTGCCAATGGTCTTCAGTATCTACACAACTTCACAGAACCGTGCTATGTGCACAGGAACATAAACAGTGAAAACATTCTTCTAAACAAAGATCTAAGAGCCAAGATAGCAAATTTTGCTCTTGCTGAAGAATCAGAAAGGAAAATAACTTCCAGTTATGCCTTGTCACGTGTGGCGAGGAGTTACATGGCTCCAGAGTATCAGGAGGCAGGGATGGTCACTACCAAAATGGACGTTTATGCCTTCGGAGTGGTGCTGTTGGAATTAATCACAGGTACGGATTCTGTTACTCTACAAGACGGGAGAGAAGCAATGCTTCATGCAGTCATAGTAAACCTCATTGGTAAAGAGAATGAAGGTGAGGTGAGTTTGTTCATTGATCCTAGCTTCACTTTAAACAATGAGAAAGTGTGTGCTCTCCAGCTAGTCAAATTAGGTCTAGCCTGCTTGATTCAAGAACCAGAAGAAAGACCAACCATGGTAGAGGTAGTCTCTAGCTTATTGAAAATCTATACAAGTTATATGGACCAAATAATACAACTAAACATCAGCAAGAGTCTTAAAATGGAGAGGTGA 1896 0.4114 MNHVAFLFFTISFFLLSFDGKAQQNYSGISIFSCKNDEKMGPSTSFLYTCNGLNKSCMAFLIFKSKPPLNSILTISNLTSSNPEELARINDVTVLTVFPTGKEVIVPLKCSCLTRDYYQTETKYVLGPSPTYFTVANDTFQGLTTCDSLKRTNPYGELDLLPGMELHVPLRCACPTLHQVTNGTKYLLTYSVNWGDNITNIATRFNVAAGNVVDANGFNTQTQTLYPFTTVLIPLSSEPLTSMTTVVSDPPNMSHLPVCSSIKCESKRKFHAAIAATGGSIVALCAVLYGVFLFRKSSARFVKRDEEGEKAKKMSSEDIRGEIAIIGHHSKVYKFEEIMEATENFSSKNRIKGCVFRGVFGNDNNILAVKKMRGDASKEVNLLERINHFNLIKLQGYCENDSCPYLVYEYMENGSLREWLRGNRSTEHQILAKRILIALDIANGLQYLHNFTEPCYVHRNINSENILLNKDLRAKIANFALAEESERKITSSYALSRVARSYMAPEYQEAGMVTTKMDVYAFGVVLLELITGTDSVTLQDGREAMLHAVIVNLIGKENEGEVSLFIDPSFTLNNEKVCALQLVKLGLACLIQEPEERPTMVEVVSSLLKIYTSYMDQIIQLNISKSLKMER 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02305 631 ProSiteProfiles Protein kinase domain profile. 345 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g02305 631 SUPERFAMILY Protein kinase-like (PK-like) 328 618 IPR011009 -
Spst8g02305 631 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 4 614 - -
Spst8g02305 631 Gene3D Transferase(Phosphotransferase) domain 1 411 627 - -
Spst8g02305 631 FunFam PTI1-like tyrosine-protein kinase 3 411 620 - -
Spst8g02305 631 ProSiteProfiles LysM domain profile. 188 233 IPR018392 -
Spst8g02305 631 Gene3D LysM domain 178 245 IPR036779 -
Spst8g02305 631 Gene3D Phosphorylase Kinase; domain 1 305 410 - -
Spst8g02305 631 Pfam Protein tyrosine and serine/threonine kinase 373 607 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02305 Spst-Chr8 33964716 33966611 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02305 4 610 Receptor kinase-like Gene Family AT2G23770 36.809 5.50e-126 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Spst8g02305 PK_Tyr_Ser-Thr 1.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02305 - - gmx:100806221 1014.99