Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02294 ATGTTGTGTGCTTGTTCCGGGGAGCAATTCAAATTTGAAGAGGCACCACAGTCACCTGAATCCTTGGCAACAAGGGATTTTTCTGCAAGCGGCCTTTCTTCAAGGACTGGGGATTGGGAATCCAAATTTGATGAGACGCAAGTGGAAGATGTTGAATCTACTCTGAAAGAAACTCTGTCATTAAACTATGAGGAAGCTCGGGCTTTGCTGGGGAGGCTTGAGTACCAAAGAGGGAACTTTGATGCTGCTCTTAAAGTTTTTGAGGGTATAGACATAAGGGATTTGGCCCCAAGGATGATCAGGGCTATAGCTGAAAGAACCAAGCAAAGAAAACCACGGTCCAAGGGGGATAATGTGCTTCCTAATGTGATGTCAATGCATTCAGTAAGCCTGCTTCTTGAGGCAATTTTGCTTAAATCCAAATCCTTAGAAGAACTTGGAGGATACACTGAGGCTGCAAAGGAGTGCAGAATTATTGTGGATATAGTTGAATCTGCCCTTCCCAAAGGTATGCCTGAGGGTATTGGTGAAGATTGTAAGTTGCAAGAAATGTTCCACAAAGCATTGGGGTTGCTTCCAAATCTATGGATCAAGGCAGGTTTTCTAGACGAAGCTGTCACTGCTTATCGGTGGGCTCTAGTCAAGCCGTGGAATTTGGAGCCCTGGAGATTGGCCTGTGTACAAAAAGATTTGGCCACCACACTACTCTATGGCGGTGTTGAAGTAAACCTACCCTCTCAGTTGCAAGTGAATGGTCTGACAACACCTATGAGTGGCACTGAAGAAGCCATACTTTTGCTATTAATACTCTCAGGAAAGATGGCACTTGAGGAAATAGACTGGGACCCTGAAATAATGGATCATCTTACATATTCACTTTCAATTACTGGAATGTTTGAATCATTGGCAAATAACGTAGAGAAGGTCCTTCCAGGTGTTTATGATCGGGCAGAGAGGTGGTACTTTCTTGCTCTTTGTTACAGTGCAGCAGGACAGAATGAAGTAGCCTTGAACCTTTTGAGGAAAGCTTGTGCTAGTTCTGAAGCAAAGCATAGACCCTATTTTCCTTCATTTTTGTTCGCTGCAAAGCTGTGTTCTTTATATCCAAACCATGCTCATGAAGGCATTAAATTTTCACAGGAAGCTATCGATCTAGCCAAGCATCAAAATGAGCATTTTCTGGGTCAGGGCCAAAAATTTCTGGGCACTTGCTACGGGGCTGCTGCTAGAATATCTGTACTGGATTCTGAAAGAATTATATTTCAAAGAGAGTCTTTGAAATTTCTAAATGCTGCTGTTGCTCTTAATGGAAATAATGATCCAGAAGTGATATTCAGCCTTGGATTGGAAAATGCAATCCAAAGAAATCTAAATGCAGCATATGACAATCTAATAATGTACTCTGACATGATGGCTGGCAGCTCAATAAGAGGTTGGCAGTTGTTACCACTCATAGTATCAGCACAGCAGCGGTTTAAGGATGCGGAAACTATAGTTGATTTTGCTTTAGATGAGGCTGGTAGTGTAGACCAGTTACAACTACTGAGACTGAAAGCTATACTTCAAATTACTCAGAAGCAACCCAAGCAAGCAATAGAGATCTACAGAATCTTGCTAGCAGTAATTGAATCACAAAAGGAGCATTGGCTTCAGGCTAAGGCATTTTGGCATGAGGCATTAACACAACAGAAGTTGGAAATGGAAGTCTGGCAAGATTTGGCTACCATTTATGCAGATCTGAGTTCCTTTCTTGATGCAAAAGCTTGTGTTGACAAGGCCCAGCTGATAGAATTTTTTTCTCCCCGAAGTTGGCATCTAACTGGGCTGCTGCTTGAATCTCGAACATTGCATAAGGAGGCACTTGTTTCCTTCTTAGTCTCGTTGTCAATAGAACCGGATTACCCTCCCGGTATAATTTCAGCTGCAAAATTGTTGCTTAAATTTGGCATGCAATCACTCCCAATTGCTAGAAGCTTTTTAATGAATGCCTTGAGATTAGACCCCACAAACCATGATGCATGGTTTAACCTTGGACGGGTTTCAAAAATGGAAGGTTCATTACAACAAGCAGCAGATTTCTTTCAAGCCGCATCTGAGCTGAAGCTTTCAGCTCCAGTGCAAAAATTTGAGTGA 2133 0.4233 MLCACSGEQFKFEEAPQSPESLATRDFSASGLSSRTGDWESKFDETQVEDVESTLKETLSLNYEEARALLGRLEYQRGNFDAALKVFEGIDIRDLAPRMIRAIAERTKQRKPRSKGDNVLPNVMSMHSVSLLLEAILLKSKSLEELGGYTEAAKECRIIVDIVESALPKGMPEGIGEDCKLQEMFHKALGLLPNLWIKAGFLDEAVTAYRWALVKPWNLEPWRLACVQKDLATTLLYGGVEVNLPSQLQVNGLTTPMSGTEEAILLLLILSGKMALEEIDWDPEIMDHLTYSLSITGMFESLANNVEKVLPGVYDRAERWYFLALCYSAAGQNEVALNLLRKACASSEAKHRPYFPSFLFAAKLCSLYPNHAHEGIKFSQEAIDLAKHQNEHFLGQGQKFLGTCYGAAARISVLDSERIIFQRESLKFLNAAVALNGNNDPEVIFSLGLENAIQRNLNAAYDNLIMYSDMMAGSSIRGWQLLPLIVSAQQRFKDAETIVDFALDEAGSVDQLQLLRLKAILQITQKQPKQAIEIYRILLAVIESQKEHWLQAKAFWHEALTQQKLEMEVWQDLATIYADLSSFLDAKACVDKAQLIEFFSPRSWHLTGLLLESRTLHKEALVSFLVSLSIEPDYPPGIISAAKLLLKFGMQSLPIARSFLMNALRLDPTNHDAWFNLGRVSKMEGSLQQAADFFQAASELKLSAPVQKFE 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02294 710 Gene3D Tetratricopeptide repeat domain 651 706 IPR011990 GO:0005515
Spst8g02294 710 MobiDBLite consensus disorder prediction 21 37 - -
Spst8g02294 710 MobiDBLite consensus disorder prediction 14 38 - -
Spst8g02294 710 SMART tpr_5 601 634 IPR019734 GO:0005515
Spst8g02294 710 SMART tpr_5 671 704 IPR019734 GO:0005515
Spst8g02294 710 SMART tpr_5 512 545 IPR019734 GO:0005515
Spst8g02294 710 SMART tpr_5 317 350 IPR019734 GO:0005515
Spst8g02294 710 PANTHER PROTEIN NPG1 1 710 IPR043376 -
Spst8g02294 710 Gene3D Tetratricopeptide repeat domain 38 398 IPR011990 GO:0005515
Spst8g02294 710 SUPERFAMILY TPR-like 424 594 IPR011990 GO:0005515
Spst8g02294 710 SUPERFAMILY TPR-like 539 701 IPR011990 GO:0005515
Spst8g02294 710 SUPERFAMILY TPR-like 65 461 IPR011990 GO:0005515
Spst8g02294 710 Gene3D Tetratricopeptide repeat domain 484 650 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02294 Spst-Chr8 33787729 33790727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02294 1 709 Calmodulin-binding Proteins AT1G27460 57.784 0.0 831