Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02271 ATGACGATGATCTGGGTTTGGCATCATCGATTGTTTCTTCTTTGCATTCTTTGTGGCCTCTTTTCTCTGCAGTTCATAAAGGGTTATGCAGATTCAAGTGCTGGAAGAATTTTGAATCAGGTGGGTGGTAATCATCAAATACATTGCTCTAGAGAAAGAAGTAGAATAGCTTGGAAGATCATTCAAGAGTATTTGATGCCCTTTGTGGATAAAGAAAAATATCACATACCAAAAAGGTGTAGGTTTCATCCTGACAATGACATATACAGAGATCAGGAGCAGCACAAGTTTCATACAGATATAAATGAATGGCAGTGTGGCTATTGTAAGAAAAGTTTTTATGAAGAGAAACATCTCGATCAGCATTTTGACAATAGACACTCCAATTTGCTTAGTTTGAATGAAAGCCAATGCTTAGCAGATGTATGTGGTGCACTGCACTGTGACCATGAAATGAATTCTGGATCAAAAAAATCAAAGTGCAATCCTGCTGCTGCTGCAAAAAATAAACATCTATGTGAGAGCTTAGCGGATAGTTGTTTTCCAATTAATGAGGGTCCTGTGACAAGCCGACTTCATGAATTGTTCTTGCACCAATTCTGTGATGCACACAGCTGCATTGGAAATAGGAAACCTTTCTCCAGAGGGCGCAGGAAGAAGACAAATGTGTTCTACATATTTGTGTCTATTTTGCTTGTGGTACTGCTGCTATTATATTATCTCTACATTTACTTATATCAGAGAGGAATGAAAAGGGAAAATCAAATGCTGAAGCGCATCTCACAAACTAGCAGAAAGAAAAAGCCATCCTAA 813 0.3813 MTMIWVWHHRLFLLCILCGLFSLQFIKGYADSSAGRILNQVGGNHQIHCSRERSRIAWKIIQEYLMPFVDKEKYHIPKRCRFHPDNDIYRDQEQHKFHTDINEWQCGYCKKSFYEEKHLDQHFDNRHSNLLSLNESQCLADVCGALHCDHEMNSGSKKSKCNPAAAAKNKHLCESLADSCFPINEGPVTSRLHELFLHQFCDAHSCIGNRKPFSRGRRKKTNVFYIFVSILLVVLLLLYYLYIYLYQRGMKRENQMLKRISQTSRKKKPS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02271 270 PANTHER ZINC FINGER PROTEIN-RELATED 12 269 - -
Spst8g02271 270 ProSitePatterns Zinc finger C2H2 type domain signature. 106 127 IPR013087 -
Spst8g02271 270 ProSiteProfiles Zinc finger C2H2 type domain profile. 104 132 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02271 Spst-Chr8 33326764 33330865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02271 27 270 C2H2 Transcription Factor Family AT5G63280 58.704 4.18e-107 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst8g02271 None None None