Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02261 ATGGTGGTGTTGTCGTCAGAGGATGAATTCGATGAGGAGCCAGGCGAGGTTATCGAATCGGCGCCGCCGCAGAGGGTGGGCGAAGAGAGACAACTCAGAGGTCTCAAGAAGAAGCTTCTCAAACACGGACACGGTTGGGAAACCCCCAACTTCAACGACGTCGTAACAGTTCACTGTGTTGGAACATTGCTCGATGGAACGGTGTTGGGTTCTTCCACTATGGTCATGGATCAACCTAGAACGTTCACTCTTGGCAATGGTGACGTTCCTGGGTTGGACCGTGGGATTACGACCATGAAGAAAGGGGAGGTGGCATTGTTCACATTACCTGCAGATGGTGAAGGTGATTTTTCGCATGATTCCAACTCGGTTGTGCAGTTTGAAGTGGAACTCCTTTCGTGGATAAGAGTGGTGGATGTGTGCAAAGATGGTGGAGTTATCAAGAAAACTTTGGAGAAGGGGAGTGGGACCGAGCGCCCTGCTGATCTGGATGAAGTGCTGGTGAGGTATCAGGTGGCACTAGTTGATGGCACTGTTGTTGAAGAAACACCGGAAGGAGGAGTTGAGTTTTACGTGAAGGATGGTCATCTTTTTCCAATGTTGACGAAAGTGATCATGACTATGACAAGGGGAGAGAAGGCTGAATTAATTGTCCAACCTCAGTATGCCTTTGGGGAGACAGGGAGAGAAGCAGGAAGTGGGCTCTGTTCAATCCCTCCAAATTCAGTACTGCATATTAATATTGAATTGGTGTCCTTCAAGCCTGTCATAAATGTTACTGGAGACTCCAAGGTGCTTAAGAAGATTTTGAAAGAAGGGGAGGGTGCTTTCACAGCCAATGAGGGTGCAAATGTTACTGTAAGCTTCACAGCTATGCTAGAAGATGGCACTGTGTTTGAGAAAAGGAGAACTGGTGAAGAACAACCCTTGGAATTCATAACCGATGAGGAACAAGTGATTGCTGGTCTAGATAGAGCTGTGGCAACTATGAAGAAGGGCGAGAGGGCCATAATTTCTATACATCCTGAGTATGCATTTGGAAATGTTGAAGTGAGACGAGATCTTGCTATTGTGCCACCTGGTTCGAATGTAGTCTATGACATTGAGATGATGGATTGTATTAAGGAGAAAGCACCATGGGAATTGAACAGTAAGGAGAAAATTGAGGTGGCAGGGAGGAAGAAAGAAGAAGGAAATGCACTTTTTAAGGGTGGCAATTATCGGCGAGCAGAGAAGAAGTATGAACAGGCAGTTGATTTTCTTAGCGATGATGGATCCTTTGGGTTTGGTGAGCAAAAGCAAGCTGACGCACTGAGAGTGTCATGCTGGTTGAATGGTGCAGCTTGTAGCCTTAAACTTAATGACCTTTTTGGAGCAATCAAGTTATGTTCACAGGTGCTTGATGTTGAATTTTGCAATGTGAAAGCTTTGTACAGACGAGCACAAGCATACATAGAAACTGGAGACTTCCTATTAGCAGATGTAGACATCAAGAAAGCACTTATGGTAGACCCCCAAAACAGGGAGGTAAAGGTAATTCAGAAGAAATTGAAGCAACTTCAAGTTGACAAAGACAAAAAAGATGCTAAGCTATACGAAAACATGTTTGCACCTAAAACAATGGACTCGTCTATGGCTATGAAGTTCCTAATTTCTGTTGCTGTTATTAGATTGAAGGTTGAGAACGACGCCAGGGAAAATGAAGATAGTGCGAGAATGGAAGAGGACACAGTTGCTGATAGCGCAGTGATTTAG 1755 0.449 MVVLSSEDEFDEEPGEVIESAPPQRVGEERQLRGLKKKLLKHGHGWETPNFNDVVTVHCVGTLLDGTVLGSSTMVMDQPRTFTLGNGDVPGLDRGITTMKKGEVALFTLPADGEGDFSHDSNSVVQFEVELLSWIRVVDVCKDGGVIKKTLEKGSGTERPADLDEVLVRYQVALVDGTVVEETPEGGVEFYVKDGHLFPMLTKVIMTMTRGEKAELIVQPQYAFGETGREAGSGLCSIPPNSVLHINIELVSFKPVINVTGDSKVLKKILKEGEGAFTANEGANVTVSFTAMLEDGTVFEKRRTGEEQPLEFITDEEQVIAGLDRAVATMKKGERAIISIHPEYAFGNVEVRRDLAIVPPGSNVVYDIEMMDCIKEKAPWELNSKEKIEVAGRKKEEGNALFKGGNYRRAEKKYEQAVDFLSDDGSFGFGEQKQADALRVSCWLNGAACSLKLNDLFGAIKLCSQVLDVEFCNVKALYRRAQAYIETGDFLLADVDIKKALMVDPQNREVKVIQKKLKQLQVDKDKKDAKLYENMFAPKTMDSSMAMKFLISVAVIRLKVENDARENEDSARMEEDTVADSAVI 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02261 584 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 282 374 IPR001179 GO:0003755
Spst8g02261 584 SUPERFAMILY TPR-like 385 536 IPR011990 GO:0005515
Spst8g02261 584 SUPERFAMILY FKBP-like 12 136 - -
Spst8g02261 584 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 163 254 IPR001179 GO:0003755
Spst8g02261 584 SUPERFAMILY FKBP-like 142 255 - -
Spst8g02261 584 FunFam Peptidylprolyl isomerase 138 254 - -
Spst8g02261 584 Coils Coil 510 530 - -
Spst8g02261 584 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 47 132 IPR001179 GO:0003755
Spst8g02261 584 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 157 251 IPR001179 GO:0003755
Spst8g02261 584 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 278 370 IPR001179 GO:0003755
Spst8g02261 584 PANTHER PEPTIDYLPROLYL ISOMERASE 137 255 - -
Spst8g02261 584 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 52 135 IPR001179 GO:0003755
Spst8g02261 584 Gene3D - 137 254 IPR046357 GO:0003755
Spst8g02261 584 Gene3D - 6 136 IPR046357 GO:0003755
Spst8g02261 584 SMART tpr_5 391 424 IPR019734 GO:0005515
Spst8g02261 584 SMART tpr_5 474 507 IPR019734 GO:0005515
Spst8g02261 584 Gene3D Tetratricopeptide repeat domain 379 534 IPR011990 GO:0005515
Spst8g02261 584 Gene3D - 255 378 IPR046357 GO:0003755
Spst8g02261 584 SUPERFAMILY FKBP-like 260 391 - -
Spst8g02261 584 ProSiteProfiles TPR repeat profile. 474 507 IPR019734 GO:0005515
Spst8g02261 584 FunFam Peptidylprolyl isomerase 255 376 - -
Spst8g02261 584 FunFam Peptidylprolyl isomerase 379 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02261 Spst-Chr8 33183720 33196284 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02261 25 537 Calmodulin-binding Proteins AT3G25230 55.662 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02261 K09571 - gmx:100798382 887.486