Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02256 ATGTGTTTACTTTTTCTCCTTTGGACAAACACGCACATAGCTTTCCAATTTCTTTTGCCGTGGTGGGTCCCACATGTTGGAACGTTGTGCATCTCATCGTCCTTAAATACCCTGCCCCTACACTTCACTTCTTCCCTTTTCCCTTCCTTTCCTCCCTCCGGTTCAGTTTTCCATCCCACCCGGTTCACTCCTCTTGTTTTCTCGCGTTGCAAAACAATGTTCTTCCACGAAGAAGCCGAAGCGGTTCAGTCCTCCTATTTCCCGGTTCTCGAAACCCTGTTCACGCCGAGCAAAATACAGGAGCTATTCTCCCTCATTAACGAACCGCCCAGCCCGGAGTCCGGTTCGTATGGATCGAACCGGGCGGTTCGGTCCACGCACGAGAGAAAGCTTCGGCGAATGCAGTCGAACCGGGAGTCAGCCAGGCGGTCCCGCTGGAGAAAGAAGCGGCATTTAGAGAGCCTCACGAACCAAGCGAACCGGTTCAGATTGGAAAACCGAGAATTAAAAAACCGATTATGCTTAACCATGCACCAGAATCTTCTTCTCTCCGCCGAGAATGAACGTCTTAGATCCGAATCCGTGACCCTTATGGCTAGACTCTCAAATCTTTATCAAATTTTAGGCACCATGATTTCACGATAG 645 0.4977 MCLLFLLWTNTHIAFQFLLPWWVPHVGTLCISSSLNTLPLHFTSSLFPSFPPSGSVFHPTRFTPLVFSRCKTMFFHEEAEAVQSSYFPVLETLFTPSKIQELFSLINEPPSPESGSYGSNRAVRSTHERKLRRMQSNRESARRSRWRKKRHLESLTNQANRFRLENRELKNRLCLTMHQNLLLSAENERLRSESVTLMARLSNLYQILGTMISR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02256 214 SMART brlzneu 125 189 IPR004827 GO:0003700|GO:0006355
Spst8g02256 214 CDD bZIP_plant_GBF1 130 179 IPR045314 GO:0003700|GO:0006355
Spst8g02256 214 Coils Coil 124 144 - -
Spst8g02256 214 Coils Coil 152 172 - -
Spst8g02256 214 Gene3D - 127 206 - -
Spst8g02256 214 SUPERFAMILY Leucine zipper domain 129 181 IPR046347 GO:0003700|GO:0006355
Spst8g02256 214 PANTHER BZIP TRANSCRIPTION FACTOR 44 113 211 - -
Spst8g02256 214 MobiDBLite consensus disorder prediction 123 141 - -
Spst8g02256 214 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 132 147 IPR004827 GO:0003700|GO:0006355
Spst8g02256 214 Pfam bZIP transcription factor 129 173 IPR004827 GO:0003700|GO:0006355
Spst8g02256 214 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 127 173 IPR004827 GO:0003700|GO:0006355
Spst8g02256 214 FunFam BZIP transcription factor 127 178 - -
Spst8g02256 214 MobiDBLite consensus disorder prediction 110 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02256 Spst-Chr8 32957248 32957892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02256 84 208 bZIP Transcription Factor Family AT3G49760 38.519 3.42e-21 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst8g02256 bZIP_1 2.9e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02256 - - gmx:102668006 226.098