Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02242 ATGACCCTACCCTTCTCTGACCGTAAGTCCCGGCGAAGCCCCAAAGCCCACCACCTTCAATCCATTTCCTTGAAACATGACGCCTCTGAAGGCGGCTTCGACGGCTCCTCCTTCTCTGGCGCGGTGTTCAACCTCTCCACCACCATTGCCGGCGCTGGCATCATGGCTCTTCCGGCAGCCATCAAGCAGCTGGGGCTGATTCCAGGTTTAGTCATGATTGTTCTGTGTGCCATGCTAACAGAATCCTCCGTCGCCATGCTCGTGAGGTTCACTCGCGCGTCCAAGTCCTCAACGTATTCCGGGGTTGTGCGTGACGCGTTTGGTGGCCTTGGTCGGAACCTCTTGTTCCTTTGCATCATCGTAAACAATGCTGGCATCCTCGTTGTGTACATGGTCATCATCGGTGATGTGTTCTCAGGATCATGGTCAGATGGGGTGCACTATTCAGGGGTTGTGGAAGAATGGTTTGGTCAACGCTGGTGGTCAACGCGTGCTGTTTTATTGTTTCTCATAACGCTTCTGGTCTTGGTGCCTCTTGCGTCATTCCGGCGTGTGGATTCACTGAGATACACCTCAGCATTATCTGTGGGGTTGGCTATTGTATTTGTGGTGATAACAGCAGGCATAGCAATTGTAAAGTTTATCGATGGAAGCATTGAGATGCCTCGATTAATGCCAAAGTTCACTGGCCCTGAGTCGTTTTGGAAGCTTTTCACCACTATTCCTATATTAGTCTCTGCTTACAACTGTCATCATAATGTTCACCCTATAGAGAATGAACTTAAAGATCCTTCCCAAATGAAGGCCATAGTCCGGACATCACTCTTACTATGCTCATCTGTGTACGTAGCAACCGGCCTTTTTGGTTTTCTCTTATTCGGAGACAAAACATTGGATGATATACTAGCCAACTTTGATGGAGATCTGGGAGTTCCTTATGGTTTATTTCTTACTGATATAGTTAGAGTGAGCTATGGCATTCACCTTATCCTTGTGTTCCCAATTGTGTTTTTCTCCCTTCGCCTCAATCTAGATGGTCTTTTGTTTCCTCATTCCATTCCTCTTGCCTATGACACCAAGAGATTCTATCTGGTGAGCTCAGTTCTCATGGCTTTCATTTTTGTTGGAGCCAATTTTGTTCCCAGCATCTGGGATGCCTTCCAATTCATAGGGGCCACTGCTGCTGTTTCTGCTGGATACATCTTTCCAGCTGCTATTGCTCTTAGGGATAGTCGTGGGGTTGCAACAAAGAAAGACAAGTTGTTGTCATGGTTTATGATACTTTTGGCTGTCTCAAGTAGCAGTGTAGCCATCTTCAGTGACTTGTATAGTGTCTACTACAGAAGTAGCTGA 1353 0.4708 MTLPFSDRKSRRSPKAHHLQSISLKHDASEGGFDGSSFSGAVFNLSTTIAGAGIMALPAAIKQLGLIPGLVMIVLCAMLTESSVAMLVRFTRASKSSTYSGVVRDAFGGLGRNLLFLCIIVNNAGILVVYMVIIGDVFSGSWSDGVHYSGVVEEWFGQRWWSTRAVLLFLITLLVLVPLASFRRVDSLRYTSALSVGLAIVFVVITAGIAIVKFIDGSIEMPRLMPKFTGPESFWKLFTTIPILVSAYNCHHNVHPIENELKDPSQMKAIVRTSLLLCSSVYVATGLFGFLLFGDKTLDDILANFDGDLGVPYGLFLTDIVRVSYGIHLILVFPIVFFSLRLNLDGLLFPHSIPLAYDTKRFYLVSSVLMAFIFVGANFVPSIWDAFQFIGATAAVSAGYIFPAAIALRDSRGVATKKDKLLSWFMILLAVSSSSVAIFSDLYSVYYRSS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02242 450 PANTHER AMINO ACID TRANSPORTER 35 432 - -
Spst8g02242 450 MobiDBLite consensus disorder prediction 1 22 - -
Spst8g02242 450 Pfam Transmembrane amino acid transporter protein 35 429 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02242 Spst-Chr8 32688410 32691456 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02242 14 450 Amino Acid or Auxin Permease AAAP Family AT3G30390 56.064 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02242 K14207 - gmx:100814034 767.303